Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
APOBEC1P41238 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
APOBEC1P41238 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
APOBEC1P41238 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.89□□□□□ -1.63
APOBEC1P41238 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.89□□□□□ -1.63
APOBEC1P41238 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.89□□□□□ -1.63
APOBEC1P41238 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
APOBEC1P41238 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
APOBEC1P41238 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
APOBEC1P41238 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
APOBEC1P41238 RNU1-19P-201ENST00000363306 165 ntBASIC4.89□□□□□ -1.63
APOBEC1P41238 RNA5SP234-201ENST00000363916 119 ntBASIC4.89□□□□□ -1.63
APOBEC1P41238 RNA5SP435-201ENST00000364044 108 ntBASIC4.89□□□□□ -1.63
APOBEC1P41238 SNORA48.4-201ENST00000391089 134 ntBASIC4.89□□□□□ -1.63
APOBEC1P41238 AC104297.1-201ENST00000393779 870 ntBASIC4.89□□□□□ -1.63
APOBEC1P41238 AP002784.2-201ENST00000397300 549 ntBASIC4.89□□□□□ -1.63
APOBEC1P41238 PEX12P1-201ENST00000400284 1048 ntBASIC4.89□□□□□ -1.63
APOBEC1P41238 HMGB3P19-201ENST00000403971 560 ntBASIC4.89□□□□□ -1.63
APOBEC1P41238 AL355615.1-201ENST00000406187 641 ntBASIC4.89□□□□□ -1.63
APOBEC1P41238 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.89□□□□□ -1.63
APOBEC1P41238 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.89□□□□□ -1.63
APOBEC1P41238 AC008173.1-201ENST00000418901 264 ntBASIC4.89□□□□□ -1.63
APOBEC1P41238 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.89□□□□□ -1.63
APOBEC1P41238 PNRC2P1-201ENST00000423940 420 ntBASIC4.89□□□□□ -1.63
APOBEC1P41238 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
APOBEC1P41238 AL389925.1-201ENST00000432257 728 ntBASIC4.89□□□□□ -1.63
APOBEC1P41238 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.89□□□□□ -1.63
APOBEC1P41238 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.89□□□□□ -1.63
APOBEC1P41238 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.89□□□□□ -1.63
APOBEC1P41238 AC069540.1-201ENST00000446320 988 ntBASIC4.89□□□□□ -1.63
APOBEC1P41238 GAPDHP25-201ENST00000447061 1001 ntBASIC4.89□□□□□ -1.63
APOBEC1P41238 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.89□□□□□ -1.63
APOBEC1P41238 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.89□□□□□ -1.63
APOBEC1P41238 CYCSP42-201ENST00000450823 238 ntBASIC4.89□□□□□ -1.63
APOBEC1P41238 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.89□□□□□ -1.63
APOBEC1P41238 RANP1-206ENST00000455094 651 ntBASIC4.89□□□□□ -1.63
APOBEC1P41238 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.89□□□□□ -1.63
APOBEC1P41238 AC022133.1-201ENST00000490961 571 ntBASIC4.89□□□□□ -1.63
APOBEC1P41238 RN7SL447P-201ENST00000494711 245 ntBASIC4.89□□□□□ -1.63
APOBEC1P41238 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.89□□□□□ -1.63
APOBEC1P41238 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.89□□□□□ -1.63
APOBEC1P41238 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.89□□□□□ -1.63
APOBEC1P41238 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
APOBEC1P41238 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.89□□□□□ -1.63
APOBEC1P41238 BLZF2P-201ENST00000553776 1130 ntBASIC4.89□□□□□ -1.63
APOBEC1P41238 AGGF1P9-201ENST00000561884 913 ntBASIC4.89□□□□□ -1.63
APOBEC1P41238 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.89□□□□□ -1.63
APOBEC1P41238 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.89□□□□□ -1.63
APOBEC1P41238 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.89□□□□□ -1.63
APOBEC1P41238 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
APOBEC1P41238 AC245100.7-201ENST00000609678 442 ntBASIC4.89□□□□□ -1.63
APOBEC1P41238 AC244107.2-201ENST00000611773 76 ntBASIC4.89□□□□□ -1.63
APOBEC1P41238 AC015660.5-201ENST00000623238 564 ntBASIC4.89□□□□□ -1.63
APOBEC1P41238 AP003400.3-201ENST00000624904 346 ntBASIC4.89□□□□□ -1.63
APOBEC1P41238 AC099654.9-201ENST00000637055 678 ntBASIC4.89□□□□□ -1.63
APOBEC1P41238 ZNF733P-202ENST00000444809 1573 ntBASIC4.89□□□□□ -1.63
APOBEC1P41238 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
APOBEC1P41238 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.89□□□□□ -1.63
APOBEC1P41238 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
APOBEC1P41238 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
APOBEC1P41238 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.89□□□□□ -1.63
APOBEC1P41238 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
APOBEC1P41238 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.89□□□□□ -1.63
APOBEC1P41238 HSPD1P11-201ENST00000508643 1702 ntBASIC4.89□□□□□ -1.63
APOBEC1P41238 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.89□□□□□ -1.63
APOBEC1P41238 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
APOBEC1P41238 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
APOBEC1P41238 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.88□□□□□ -1.63
APOBEC1P41238 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
APOBEC1P41238 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
APOBEC1P41238 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
APOBEC1P41238 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
APOBEC1P41238 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
APOBEC1P41238 RNU6-481P-201ENST00000384194 107 ntBASIC4.88□□□□□ -1.63
APOBEC1P41238 RNU4-31P-201ENST00000384211 141 ntBASIC4.88□□□□□ -1.63
APOBEC1P41238 MIR122-201ENST00000385044 85 ntBASIC4.88□□□□□ -1.63
APOBEC1P41238 HSPA8P15-201ENST00000401676 786 ntBASIC4.88□□□□□ -1.63
APOBEC1P41238 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
APOBEC1P41238 RNA5SP487-201ENST00000410186 122 ntBASIC4.88□□□□□ -1.63
APOBEC1P41238 GPS2P1-201ENST00000411761 986 ntBASIC4.88□□□□□ -1.63
APOBEC1P41238 MTND4P11-201ENST00000417020 1058 ntBASIC4.88□□□□□ -1.63
APOBEC1P41238 AL513325.1-201ENST00000417716 1034 ntBASIC4.88□□□□□ -1.63
APOBEC1P41238 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.88□□□□□ -1.63
APOBEC1P41238 OR6K4P-201ENST00000423179 955 ntBASIC4.88□□□□□ -1.63
APOBEC1P41238 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.88□□□□□ -1.63
APOBEC1P41238 AL121776.1-201ENST00000429337 372 ntBASIC4.88□□□□□ -1.63
APOBEC1P41238 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.88□□□□□ -1.63
APOBEC1P41238 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
APOBEC1P41238 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.88□□□□□ -1.63
APOBEC1P41238 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.88□□□□□ -1.63
APOBEC1P41238 RPL7P45-201ENST00000455851 743 ntBASIC4.88□□□□□ -1.63
APOBEC1P41238 HSPE1P22-201ENST00000456856 327 ntBASIC4.88□□□□□ -1.63
APOBEC1P41238 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.88□□□□□ -1.63
APOBEC1P41238 AC107015.1-201ENST00000466902 747 ntBASIC4.88□□□□□ -1.63
APOBEC1P41238 RPL35AP19-201ENST00000469425 329 ntBASIC4.88□□□□□ -1.63
APOBEC1P41238 CBX1P5-201ENST00000475330 559 ntBASIC4.88□□□□□ -1.63
APOBEC1P41238 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
APOBEC1P41238 RPL7P40-201ENST00000481703 745 ntBASIC4.88□□□□□ -1.63
APOBEC1P41238 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.88□□□□□ -1.63
APOBEC1P41238 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms