Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.78□□□□□ -1.48
KRT9P35527 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.78□□□□□ -1.48
KRT9P35527 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.78□□□□□ -1.48
KRT9P35527 AC068993.1-201ENST00000546724 589 ntBASIC5.78□□□□□ -1.48
KRT9P35527 LSM3P2-201ENST00000551246 273 ntBASIC5.78□□□□□ -1.48
KRT9P35527 AC022404.1-201ENST00000555320 273 ntBASIC5.78□□□□□ -1.48
KRT9P35527 AL136520.1-202ENST00000555494 763 ntBASIC5.78□□□□□ -1.48
KRT9P35527 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.78□□□□□ -1.48
KRT9P35527 AL049870.4-201ENST00000555741 486 ntBASIC5.78□□□□□ -1.48
KRT9P35527 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
KRT9P35527 MIR3614-201ENST00000581261 86 ntBASIC5.78□□□□□ -1.48
KRT9P35527 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.78□□□□□ -1.48
KRT9P35527 AC005972.3-201ENST00000606304 481 ntBASIC5.78□□□□□ -1.48
KRT9P35527 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.78□□□□□ -1.48
KRT9P35527 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.78□□□□□ -1.48
KRT9P35527 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.78□□□□□ -1.48
KRT9P35527 AC126175.1-201ENST00000617041 758 ntBASIC5.78□□□□□ -1.48
KRT9P35527 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRT9P35527 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.78□□□□□ -1.48
KRT9P35527 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRT9P35527 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRT9P35527 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRT9P35527 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRT9P35527 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
KRT9P35527 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
KRT9P35527 ZNF90P1-201ENST00000480493 1951 ntBASIC5.77□□□□□ -1.49
KRT9P35527 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
KRT9P35527 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.77□□□□□ -1.49
KRT9P35527 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.77□□□□□ -1.49
KRT9P35527 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
KRT9P35527 RNA5SP178-201ENST00000410380 128 ntBASIC5.77□□□□□ -1.49
KRT9P35527 RNU4-74P-201ENST00000411280 161 ntBASIC5.77□□□□□ -1.49
KRT9P35527 AC002524.1-201ENST00000411687 547 ntBASIC5.77□□□□□ -1.49
KRT9P35527 DPY19L1P2-201ENST00000426647 915 ntBASIC5.77□□□□□ -1.49
KRT9P35527 ELOCP3-201ENST00000439303 348 ntBASIC5.77□□□□□ -1.49
KRT9P35527 AL390119.1-201ENST00000440329 312 ntBASIC5.77□□□□□ -1.49
KRT9P35527 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.77□□□□□ -1.49
KRT9P35527 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.77□□□□□ -1.49
KRT9P35527 NPM1P39-201ENST00000449818 867 ntBASIC5.77□□□□□ -1.49
KRT9P35527 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.77□□□□□ -1.49
KRT9P35527 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.77□□□□□ -1.49
KRT9P35527 RPS27AP2-201ENST00000457576 465 ntBASIC5.77□□□□□ -1.49
KRT9P35527 AC058823.1-201ENST00000485315 474 ntBASIC5.77□□□□□ -1.49
KRT9P35527 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.77□□□□□ -1.49
KRT9P35527 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.77□□□□□ -1.49
KRT9P35527 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
KRT9P35527 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.77□□□□□ -1.49
KRT9P35527 RNU6-513P-201ENST00000516104 104 ntBASIC5.77□□□□□ -1.49
KRT9P35527 SNORA76.2-201ENST00000517095 137 ntBASIC5.77□□□□□ -1.49
KRT9P35527 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.77□□□□□ -1.49
KRT9P35527 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.77□□□□□ -1.49
KRT9P35527 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.77□□□□□ -1.49
KRT9P35527 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
KRT9P35527 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.77□□□□□ -1.49
KRT9P35527 AC006349.1-201ENST00000555526 235 ntBASIC5.77□□□□□ -1.49
KRT9P35527 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
KRT9P35527 SS18L2P2-201ENST00000583960 235 ntBASIC5.77□□□□□ -1.49
KRT9P35527 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.77□□□□□ -1.49
KRT9P35527 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.77□□□□□ -1.49
KRT9P35527 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.77□□□□□ -1.49
KRT9P35527 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.77□□□□□ -1.49
KRT9P35527 ZNF92P2-201ENST00000600543 1059 ntBASIC5.77□□□□□ -1.49
KRT9P35527 AC011626.1-201ENST00000604710 562 ntBASIC5.77□□□□□ -1.49
KRT9P35527 AL445493.3-201ENST00000619568 477 ntBASIC5.77□□□□□ -1.49
KRT9P35527 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.77□□□□□ -1.49
KRT9P35527 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.77□□□□□ -1.49
KRT9P35527 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
KRT9P35527 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
KRT9P35527 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRT9P35527 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
KRT9P35527 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRT9P35527 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRT9P35527 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRT9P35527 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRT9P35527 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
KRT9P35527 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.76□□□□□ -1.49
KRT9P35527 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
KRT9P35527 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRT9P35527 AC211486.3-201ENST00000412694 621 ntBASIC5.76□□□□□ -1.49
KRT9P35527 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.76□□□□□ -1.49
KRT9P35527 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.76□□□□□ -1.49
KRT9P35527 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.76□□□□□ -1.49
KRT9P35527 PTP4A1P3-201ENST00000433661 420 ntBASIC5.76□□□□□ -1.49
KRT9P35527 GSTM5P1-201ENST00000434751 660 ntBASIC5.76□□□□□ -1.49
KRT9P35527 AC105399.1-202ENST00000447303 205 ntBASIC5.76□□□□□ -1.49
KRT9P35527 RPL23AP23-201ENST00000452590 471 ntBASIC5.76□□□□□ -1.49
KRT9P35527 AC144530.1-201ENST00000452862 555 ntBASIC5.76□□□□□ -1.49
KRT9P35527 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.76□□□□□ -1.49
KRT9P35527 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
KRT9P35527 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRT9P35527 AC090638.1-201ENST00000498296 909 ntBASIC5.76□□□□□ -1.49
KRT9P35527 HMGB1P44-201ENST00000508597 572 ntBASIC5.76□□□□□ -1.49
KRT9P35527 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.76□□□□□ -1.49
KRT9P35527 RNU6-1102P-201ENST00000516149 96 ntBASIC5.76□□□□□ -1.49
KRT9P35527 SNORA26.10-201ENST00000516427 141 ntBASIC5.76□□□□□ -1.49
KRT9P35527 AP003049.1-201ENST00000529418 457 ntBASIC5.76□□□□□ -1.49
KRT9P35527 AC027544.3-201ENST00000535082 757 ntBASIC5.76□□□□□ -1.49
KRT9P35527 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.76□□□□□ -1.49
KRT9P35527 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.76□□□□□ -1.49
KRT9P35527 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms