Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.6□□□□□ -1.51
HOXC8P31273 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXC8P31273 ELOCP28-201ENST00000590044 317 ntBASIC5.6□□□□□ -1.51
HOXC8P31273 AP001521.2-201ENST00000608772 546 ntBASIC5.6□□□□□ -1.51
HOXC8P31273 AL161616.1-201ENST00000611867 286 ntBASIC5.6□□□□□ -1.51
HOXC8P31273 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.6□□□□□ -1.51
HOXC8P31273 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXC8P31273 AC000095.2-202ENST00000637415 154 ntBASIC5.6□□□□□ -1.51
HOXC8P31273 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXC8P31273 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXC8P31273 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXC8P31273 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXC8P31273 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC8P31273 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXC8P31273 AL137141.1-201ENST00000624622 4836 ntBASIC5.6□□□□□ -1.51
HOXC8P31273 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXC8P31273 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXC8P31273 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
HOXC8P31273 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HOXC8P31273 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC8P31273 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC8P31273 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC8P31273 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXC8P31273 RLIMP2-201ENST00000427891 1563 ntBASIC5.59□□□□□ -1.51
HOXC8P31273 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC8P31273 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC8P31273 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXC8P31273 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC8P31273 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXC8P31273 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
HOXC8P31273 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC8P31273 MIR141-201ENST00000384975 95 ntBASIC5.59□□□□□ -1.51
HOXC8P31273 SNORA48.4-201ENST00000391089 134 ntBASIC5.59□□□□□ -1.51
HOXC8P31273 AC019050.1-201ENST00000418508 492 ntBASIC5.59□□□□□ -1.51
HOXC8P31273 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXC8P31273 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXC8P31273 TXNP2-201ENST00000443918 295 ntBASIC5.59□□□□□ -1.51
HOXC8P31273 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXC8P31273 AC009963.4-201ENST00000448535 339 ntBASIC5.59□□□□□ -1.51
HOXC8P31273 TCEA1P1-201ENST00000449716 880 ntBASIC5.59□□□□□ -1.51
HOXC8P31273 AC063943.1-201ENST00000465434 453 ntBASIC5.59□□□□□ -1.51
HOXC8P31273 RN7SL738P-201ENST00000470264 297 ntBASIC5.59□□□□□ -1.51
HOXC8P31273 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXC8P31273 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXC8P31273 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXC8P31273 AC108043.1-201ENST00000512696 574 ntBASIC5.59□□□□□ -1.51
HOXC8P31273 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXC8P31273 AC136777.2-201ENST00000522979 358 ntBASIC5.59□□□□□ -1.51
HOXC8P31273 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXC8P31273 AP003168.1-201ENST00000530091 307 ntBASIC5.59□□□□□ -1.51
HOXC8P31273 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC8P31273 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXC8P31273 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXC8P31273 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXC8P31273 MIR4270-201ENST00000581799 70 ntBASIC5.59□□□□□ -1.51
HOXC8P31273 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXC8P31273 HMGB1P51-201ENST00000605166 638 ntBASIC5.59□□□□□ -1.51
HOXC8P31273 AL135786.2-201ENST00000608422 615 ntBASIC5.59□□□□□ -1.51
HOXC8P31273 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
HOXC8P31273 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXC8P31273 AP000346.3-201ENST00000622821 210 ntBASIC5.59□□□□□ -1.51
HOXC8P31273 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXC8P31273 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXC8P31273 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXC8P31273 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC8P31273 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC8P31273 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC8P31273 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXC8P31273 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC8P31273 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC8P31273 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC8P31273 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.59□□□□□ -1.52
HOXC8P31273 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HOXC8P31273 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HOXC8P31273 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
HOXC8P31273 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HOXC8P31273 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
HOXC8P31273 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.58□□□□□ -1.52
HOXC8P31273 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC8P31273 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
HOXC8P31273 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC8P31273 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC8P31273 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC8P31273 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXC8P31273 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
HOXC8P31273 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXC8P31273 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC8P31273 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC8P31273 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC8P31273 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HOXC8P31273 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
HOXC8P31273 RNU6-398P-201ENST00000384143 109 ntBASIC5.58□□□□□ -1.52
HOXC8P31273 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HOXC8P31273 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC8P31273 RPS4XP9-201ENST00000405151 780 ntBASIC5.58□□□□□ -1.52
HOXC8P31273 AC019070.1-201ENST00000415008 1024 ntBASIC5.58□□□□□ -1.52
HOXC8P31273 AC092570.3-201ENST00000420113 693 ntBASIC5.58□□□□□ -1.52
HOXC8P31273 AL359265.2-201ENST00000434367 631 ntBASIC5.58□□□□□ -1.52
HOXC8P31273 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.58□□□□□ -1.52
HOXC8P31273 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms