Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 MTCYBP13-201ENST00000578634 1093 ntBASIC5.74□□□□□ -1.49
HOXA13P31271 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXA13P31271 AL360012.1-201ENST00000602813 131 ntBASIC5.74□□□□□ -1.49
HOXA13P31271 AL031320.1-201ENST00000604177 357 ntBASIC5.74□□□□□ -1.49
HOXA13P31271 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXA13P31271 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.74□□□□□ -1.49
HOXA13P31271 AC009032.1-201ENST00000617574 431 ntBASIC5.74□□□□□ -1.49
HOXA13P31271 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.74□□□□□ -1.49
HOXA13P31271 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HOXA13P31271 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.74□□□□□ -1.49
HOXA13P31271 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.74□□□□□ -1.49
HOXA13P31271 AP001029.2-203ENST00000589795 4910 ntBASIC5.74□□□□□ -1.49
HOXA13P31271 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HOXA13P31271 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HOXA13P31271 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.74□□□□□ -1.49
HOXA13P31271 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXA13P31271 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HOXA13P31271 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HOXA13P31271 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.73□□□□□ -1.49
HOXA13P31271 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXA13P31271 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXA13P31271 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HOXA13P31271 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXA13P31271 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.73□□□□□ -1.49
HOXA13P31271 AC003985.2-201ENST00000562268 1669 ntBASIC5.73□□□□□ -1.49
HOXA13P31271 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.73□□□□□ -1.49
HOXA13P31271 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
HOXA13P31271 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.73□□□□□ -1.49
HOXA13P31271 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HOXA13P31271 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXA13P31271 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HOXA13P31271 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.73□□□□□ -1.49
HOXA13P31271 OR13C3-201ENST00000374781 1108 ntBASIC5.73□□□□□ -1.49
HOXA13P31271 AMZ2P2-201ENST00000406819 1057 ntBASIC5.73□□□□□ -1.49
HOXA13P31271 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.73□□□□□ -1.49
HOXA13P31271 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.73□□□□□ -1.49
HOXA13P31271 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.73□□□□□ -1.49
HOXA13P31271 RPS27AP6-201ENST00000427962 448 ntBASIC5.73□□□□□ -1.49
HOXA13P31271 AL049745.1-201ENST00000433953 286 ntBASIC5.73□□□□□ -1.49
HOXA13P31271 ZFAND6P1-201ENST00000434138 605 ntBASIC5.73□□□□□ -1.49
HOXA13P31271 MRPS33P4-201ENST00000434892 317 ntBASIC5.73□□□□□ -1.49
HOXA13P31271 RPS29P9-201ENST00000440360 171 ntBASIC5.73□□□□□ -1.49
HOXA13P31271 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.73□□□□□ -1.49
HOXA13P31271 AL161722.1-201ENST00000446972 1032 ntBASIC5.73□□□□□ -1.49
HOXA13P31271 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.73□□□□□ -1.49
HOXA13P31271 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.73□□□□□ -1.49
HOXA13P31271 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.73□□□□□ -1.49
HOXA13P31271 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.73□□□□□ -1.49
HOXA13P31271 AC009117.1-201ENST00000563948 554 ntBASIC5.73□□□□□ -1.49
HOXA13P31271 MIR4700-201ENST00000578311 74 ntBASIC5.73□□□□□ -1.49
HOXA13P31271 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.73□□□□□ -1.49
HOXA13P31271 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.73□□□□□ -1.49
HOXA13P31271 AC005377.1-201ENST00000605126 456 ntBASIC5.73□□□□□ -1.49
HOXA13P31271 AC015802.5-201ENST00000607478 399 ntBASIC5.73□□□□□ -1.49
HOXA13P31271 AL023583.1-201ENST00000607518 1143 ntBASIC5.73□□□□□ -1.49
HOXA13P31271 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.73□□□□□ -1.49
HOXA13P31271 OR8G7P-201ENST00000616658 848 ntBASIC5.73□□□□□ -1.49
HOXA13P31271 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HOXA13P31271 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXA13P31271 AC063976.2-201ENST00000425667 3556 ntBASIC5.73□□□□□ -1.49
HOXA13P31271 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.73□□□□□ -1.49
HOXA13P31271 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXA13P31271 DDX18P6-201ENST00000450119 1997 ntBASIC5.73□□□□□ -1.49
HOXA13P31271 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXA13P31271 SAMMSON-210ENST00000641260 1308 ntBASIC5.73□□□□□ -1.49
HOXA13P31271 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HOXA13P31271 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXA13P31271 AC132825.1-201ENST00000463573 2247 ntBASIC5.72□□□□□ -1.49
HOXA13P31271 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXA13P31271 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.72□□□□□ -1.49
HOXA13P31271 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXA13P31271 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.72□□□□□ -1.49
HOXA13P31271 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
HOXA13P31271 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXA13P31271 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXA13P31271 Z95114.1-201ENST00000624264 14574 ntBASIC5.72□□□□□ -1.49
HOXA13P31271 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXA13P31271 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXA13P31271 MIR421-201ENST00000365696 85 ntBASIC5.72□□□□□ -1.49
HOXA13P31271 U3.32-201ENST00000408116 212 ntBASIC5.72□□□□□ -1.49
HOXA13P31271 GLUD1P9-201ENST00000420997 1173 ntBASIC5.72□□□□□ -1.49
HOXA13P31271 MTATP6P11-201ENST00000428071 670 ntBASIC5.72□□□□□ -1.49
HOXA13P31271 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.72□□□□□ -1.49
HOXA13P31271 AC008072.1-201ENST00000434254 824 ntBASIC5.72□□□□□ -1.49
HOXA13P31271 AC046176.1-201ENST00000435260 1170 ntBASIC5.72□□□□□ -1.49
HOXA13P31271 AC006466.1-201ENST00000438721 289 ntBASIC5.72□□□□□ -1.49
HOXA13P31271 AL691517.1-201ENST00000440833 1235 ntBASIC5.72□□□□□ -1.49
HOXA13P31271 TXNP5-201ENST00000441043 315 ntBASIC5.72□□□□□ -1.49
HOXA13P31271 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.72□□□□□ -1.49
HOXA13P31271 AP002345.1-201ENST00000456493 928 ntBASIC5.72□□□□□ -1.49
HOXA13P31271 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.72□□□□□ -1.49
HOXA13P31271 NIFKP7-201ENST00000503365 834 ntBASIC5.72□□□□□ -1.49
HOXA13P31271 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXA13P31271 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.72□□□□□ -1.49
HOXA13P31271 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.72□□□□□ -1.49
HOXA13P31271 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.72□□□□□ -1.49
HOXA13P31271 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXA13P31271 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.72□□□□□ -1.49
HOXA13P31271 MORF4L1P3-201ENST00000525966 950 ntBASIC5.72□□□□□ -1.49
HOXA13P31271 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms