Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC006130.2-201ENST00000586202 326 ntBASIC5.68□□□□□ -1.5
COL4A5P29400 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.68□□□□□ -1.5
COL4A5P29400 AL023881.1-201ENST00000621088 301 ntBASIC5.68□□□□□ -1.5
COL4A5P29400 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.68□□□□□ -1.5
COL4A5P29400 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL4A5P29400 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL4A5P29400 ZNF137P-201ENST00000456718 1920 ntBASIC5.68□□□□□ -1.5
COL4A5P29400 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC5.68□□□□□ -1.5
COL4A5P29400 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL4A5P29400 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL4A5P29400 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL4A5P29400 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
COL4A5P29400 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
COL4A5P29400 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL4A5P29400 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.67□□□□□ -1.5
COL4A5P29400 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.67□□□□□ -1.5
COL4A5P29400 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
COL4A5P29400 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
COL4A5P29400 RNU1-130P-201ENST00000363930 160 ntBASIC5.67□□□□□ -1.5
COL4A5P29400 RNU1-64P-201ENST00000365443 163 ntBASIC5.67□□□□□ -1.5
COL4A5P29400 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.67□□□□□ -1.5
COL4A5P29400 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL4A5P29400 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
COL4A5P29400 RPS12P10-201ENST00000427031 377 ntBASIC5.67□□□□□ -1.5
COL4A5P29400 AC114755.5-201ENST00000447760 831 ntBASIC5.67□□□□□ -1.5
COL4A5P29400 NUTF2P3-201ENST00000448540 384 ntBASIC5.67□□□□□ -1.5
COL4A5P29400 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.67□□□□□ -1.5
COL4A5P29400 AL162591.2-201ENST00000449634 317 ntBASIC5.67□□□□□ -1.5
COL4A5P29400 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.67□□□□□ -1.5
COL4A5P29400 NIFKP7-201ENST00000503365 834 ntBASIC5.67□□□□□ -1.5
COL4A5P29400 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.67□□□□□ -1.5
COL4A5P29400 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.67□□□□□ -1.5
COL4A5P29400 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.67□□□□□ -1.5
COL4A5P29400 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.67□□□□□ -1.5
COL4A5P29400 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
COL4A5P29400 AC245389.1-201ENST00000605141 529 ntBASIC5.67□□□□□ -1.5
COL4A5P29400 AL133243.1-201ENST00000614487 366 ntBASIC5.67□□□□□ -1.5
COL4A5P29400 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL4A5P29400 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL4A5P29400 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
COL4A5P29400 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL4A5P29400 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.67□□□□□ -1.5
COL4A5P29400 AC025031.4-201ENST00000621248 3271 ntBASIC5.67□□□□□ -1.5
COL4A5P29400 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
COL4A5P29400 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL4A5P29400 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL4A5P29400 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC5.67□□□□□ -1.5
COL4A5P29400 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.67□□□□□ -1.5
COL4A5P29400 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
COL4A5P29400 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL4A5P29400 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL4A5P29400 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL4A5P29400 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL4A5P29400 AL158827.1-201ENST00000416300 391 ntBASIC5.66□□□□□ -1.5
COL4A5P29400 AL358176.3-201ENST00000420757 454 ntBASIC5.66□□□□□ -1.5
COL4A5P29400 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.66□□□□□ -1.5
COL4A5P29400 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.66□□□□□ -1.5
COL4A5P29400 AC111000.6-201ENST00000514471 709 ntBASIC5.66□□□□□ -1.5
COL4A5P29400 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.66□□□□□ -1.5
COL4A5P29400 PRPF19P1-201ENST00000584766 898 ntBASIC5.66□□□□□ -1.5
COL4A5P29400 AC018695.5-201ENST00000605872 315 ntBASIC5.66□□□□□ -1.5
COL4A5P29400 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.66□□□□□ -1.5
COL4A5P29400 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL4A5P29400 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.66□□□□□ -1.5
COL4A5P29400 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
COL4A5P29400 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.66□□□□□ -1.5
COL4A5P29400 AC018628.1-201ENST00000624147 3819 ntBASIC5.66□□□□□ -1.5
COL4A5P29400 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL4A5P29400 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL4A5P29400 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL4A5P29400 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL4A5P29400 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
COL4A5P29400 AC007618.1-201ENST00000366455 732 ntBASIC5.66□□□□□ -1.5
COL4A5P29400 RN7SKP17-201ENST00000411242 351 ntBASIC5.66□□□□□ -1.5
COL4A5P29400 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.66□□□□□ -1.5
COL4A5P29400 PHBP16-201ENST00000446318 950 ntBASIC5.66□□□□□ -1.5
COL4A5P29400 MRPL35P2-201ENST00000448009 511 ntBASIC5.66□□□□□ -1.5
COL4A5P29400 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.66□□□□□ -1.5
COL4A5P29400 RN7SL303P-201ENST00000469773 251 ntBASIC5.66□□□□□ -1.5
COL4A5P29400 AC010476.1-201ENST00000519111 851 ntBASIC5.66□□□□□ -1.5
COL4A5P29400 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.66□□□□□ -1.5
COL4A5P29400 AC093388.1-201ENST00000609166 430 ntBASIC5.66□□□□□ -1.5
COL4A5P29400 AC112200.1-201ENST00000625015 234 ntBASIC5.66□□□□□ -1.5
COL4A5P29400 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL4A5P29400 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL4A5P29400 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL4A5P29400 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL4A5P29400 ZFRP1-201ENST00000457579 2970 ntBASIC5.65□□□□□ -1.5
COL4A5P29400 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COL4A5P29400 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.65□□□□□ -1.5
COL4A5P29400 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC5.65□□□□□ -1.5
COL4A5P29400 AL360270.2-201ENST00000562952 5985 ntBASIC5.65□□□□□ -1.51
COL4A5P29400 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC5.65□□□□□ -1.51
COL4A5P29400 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL4A5P29400 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL4A5P29400 SNORA71.2-201ENST00000364941 134 ntBASIC5.65□□□□□ -1.51
COL4A5P29400 GPS2P1-201ENST00000411761 986 ntBASIC5.65□□□□□ -1.51
COL4A5P29400 ACTR3P2-201ENST00000439585 1257 ntBASIC5.65□□□□□ -1.51
COL4A5P29400 RN7SL517P-201ENST00000462240 305 ntBASIC5.65□□□□□ -1.51
COL4A5P29400 AC104763.1-201ENST00000475274 360 ntBASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms