Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.21□□□□□ -1.58
ABCD3P28288 MIR4311-201ENST00000580794 100 ntBASIC5.21□□□□□ -1.58
ABCD3P28288 AP003117.1-201ENST00000602771 554 ntBASIC5.21□□□□□ -1.58
ABCD3P28288 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.21□□□□□ -1.58
ABCD3P28288 AC124016.2-201ENST00000610058 665 ntBASIC5.21□□□□□ -1.58
ABCD3P28288 RNU6-1192P-201ENST00000612197 107 ntBASIC5.21□□□□□ -1.58
ABCD3P28288 RNA5SP440-201ENST00000612665 119 ntBASIC5.21□□□□□ -1.58
ABCD3P28288 AC126175.1-201ENST00000617041 758 ntBASIC5.21□□□□□ -1.58
ABCD3P28288 RNU6-489P-201ENST00000618289 107 ntBASIC5.21□□□□□ -1.58
ABCD3P28288 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.21□□□□□ -1.58
ABCD3P28288 TMEM30CP-203ENST00000637814 1035 ntBASIC5.21□□□□□ -1.58
ABCD3P28288 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ABCD3P28288 YES1P1-201ENST00000418510 1628 ntBASIC5.21□□□□□ -1.58
ABCD3P28288 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ABCD3P28288 RNF6P1-201ENST00000444889 1784 ntBASIC5.21□□□□□ -1.58
ABCD3P28288 AC114786.1-201ENST00000512892 1415 ntBASIC5.21□□□□□ -1.58
ABCD3P28288 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
ABCD3P28288 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
ABCD3P28288 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
ABCD3P28288 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ABCD3P28288 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ABCD3P28288 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ABCD3P28288 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ABCD3P28288 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ABCD3P28288 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ABCD3P28288 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ABCD3P28288 RNA5SP122-201ENST00000384457 108 ntBASIC5.2□□□□□ -1.58
ABCD3P28288 GSTM3P2-201ENST00000412746 530 ntBASIC5.2□□□□□ -1.58
ABCD3P28288 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.2□□□□□ -1.58
ABCD3P28288 PTP4A1P7-201ENST00000423476 514 ntBASIC5.2□□□□□ -1.58
ABCD3P28288 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.2□□□□□ -1.58
ABCD3P28288 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.2□□□□□ -1.58
ABCD3P28288 AC006335.2-201ENST00000437993 330 ntBASIC5.2□□□□□ -1.58
ABCD3P28288 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.2□□□□□ -1.58
ABCD3P28288 AC092013.1-201ENST00000438795 332 ntBASIC5.2□□□□□ -1.58
ABCD3P28288 HSFY3P-201ENST00000444242 1191 ntBASIC5.2□□□□□ -1.58
ABCD3P28288 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.2□□□□□ -1.58
ABCD3P28288 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ABCD3P28288 NPM1P19-201ENST00000450070 712 ntBASIC5.2□□□□□ -1.58
ABCD3P28288 AC016724.1-201ENST00000453215 421 ntBASIC5.2□□□□□ -1.58
ABCD3P28288 YWHAEP1-201ENST00000453697 763 ntBASIC5.2□□□□□ -1.58
ABCD3P28288 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.2□□□□□ -1.58
ABCD3P28288 AC010374.1-201ENST00000503762 1237 ntBASIC5.2□□□□□ -1.58
ABCD3P28288 AC093801.2-201ENST00000503966 1050 ntBASIC5.2□□□□□ -1.58
ABCD3P28288 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ABCD3P28288 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.2□□□□□ -1.58
ABCD3P28288 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.2□□□□□ -1.58
ABCD3P28288 IGLV3-24-201ENST00000517477 197 ntBASIC5.2□□□□□ -1.58
ABCD3P28288 TMEM97P2-201ENST00000517841 403 ntBASIC5.2□□□□□ -1.58
ABCD3P28288 HMGB1P1-201ENST00000522557 636 ntBASIC5.2□□□□□ -1.58
ABCD3P28288 AC137627.1-201ENST00000545761 289 ntBASIC5.2□□□□□ -1.58
ABCD3P28288 AL049872.1-201ENST00000556323 322 ntBASIC5.2□□□□□ -1.58
ABCD3P28288 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.2□□□□□ -1.58
ABCD3P28288 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
ABCD3P28288 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.2□□□□□ -1.58
ABCD3P28288 MIR4505-201ENST00000582238 73 ntBASIC5.2□□□□□ -1.58
ABCD3P28288 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.2□□□□□ -1.58
ABCD3P28288 AC008115.3-201ENST00000614874 549 ntBASIC5.2□□□□□ -1.58
ABCD3P28288 AL669942.2-201ENST00000620352 697 ntBASIC5.2□□□□□ -1.58
ABCD3P28288 AC009269.6-201ENST00000621778 588 ntBASIC5.2□□□□□ -1.58
ABCD3P28288 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
ABCD3P28288 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.2□□□□□ -1.58
ABCD3P28288 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ABCD3P28288 AC107027.3-201ENST00000565095 3473 ntBASIC5.2□□□□□ -1.58
ABCD3P28288 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
ABCD3P28288 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ABCD3P28288 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
ABCD3P28288 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.2□□□□□ -1.58
ABCD3P28288 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ABCD3P28288 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ABCD3P28288 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ABCD3P28288 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
ABCD3P28288 AC100871.1-201ENST00000507871 1456 ntBASIC5.2□□□□□ -1.58
ABCD3P28288 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ABCD3P28288 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
ABCD3P28288 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ABCD3P28288 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ABCD3P28288 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.19□□□□□ -1.58
ABCD3P28288 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ABCD3P28288 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ABCD3P28288 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ABCD3P28288 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
ABCD3P28288 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ABCD3P28288 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ABCD3P28288 ENSAP3-201ENST00000312710 333 ntBASIC5.19□□□□□ -1.58
ABCD3P28288 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
ABCD3P28288 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ABCD3P28288 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ABCD3P28288 DNAJC19P6-201ENST00000401853 280 ntBASIC5.19□□□□□ -1.58
ABCD3P28288 RPL6P29-201ENST00000414863 865 ntBASIC5.19□□□□□ -1.58
ABCD3P28288 AL596448.1-201ENST00000415024 392 ntBASIC5.19□□□□□ -1.58
ABCD3P28288 MTND2P15-201ENST00000418575 892 ntBASIC5.19□□□□□ -1.58
ABCD3P28288 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.19□□□□□ -1.58
ABCD3P28288 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.19□□□□□ -1.58
ABCD3P28288 AC099336.2-201ENST00000422457 254 ntBASIC5.19□□□□□ -1.58
ABCD3P28288 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.19□□□□□ -1.58
ABCD3P28288 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.19□□□□□ -1.58
ABCD3P28288 TMEM183AP1-205ENST00000432739 290 ntBASIC5.19□□□□□ -1.58
ABCD3P28288 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.19□□□□□ -1.58
ABCD3P28288 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms