Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.57□□□□□ -1.52
CD40P25942 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC5.57□□□□□ -1.52
CD40P25942 RPS27AP15-201ENST00000447672 466 ntBASIC5.57□□□□□ -1.52
CD40P25942 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.57□□□□□ -1.52
CD40P25942 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.57□□□□□ -1.52
CD40P25942 RPL36AP33-201ENST00000450395 310 ntBASIC5.57□□□□□ -1.52
CD40P25942 RN7SL170P-201ENST00000487098 295 ntBASIC5.57□□□□□ -1.52
CD40P25942 AC021006.1-201ENST00000489849 553 ntBASIC5.57□□□□□ -1.52
CD40P25942 RPL37P23-201ENST00000492641 294 ntBASIC5.57□□□□□ -1.52
CD40P25942 AC018797.1-201ENST00000510791 255 ntBASIC5.57□□□□□ -1.52
CD40P25942 RNY4P37-201ENST00000516225 96 ntBASIC5.57□□□□□ -1.52
CD40P25942 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.57□□□□□ -1.52
CD40P25942 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.57□□□□□ -1.52
CD40P25942 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.57□□□□□ -1.52
CD40P25942 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.57□□□□□ -1.52
CD40P25942 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.57□□□□□ -1.52
CD40P25942 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.57□□□□□ -1.52
CD40P25942 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CD40P25942 AP000873.5-201ENST00000533906 236 ntBASIC5.57□□□□□ -1.52
CD40P25942 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.57□□□□□ -1.52
CD40P25942 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.57□□□□□ -1.52
CD40P25942 OR7K1P-201ENST00000546439 926 ntBASIC5.57□□□□□ -1.52
CD40P25942 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.57□□□□□ -1.52
CD40P25942 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.57□□□□□ -1.52
CD40P25942 TPRX1P1-201ENST00000557620 319 ntBASIC5.57□□□□□ -1.52
CD40P25942 AC027807.1-201ENST00000559921 996 ntBASIC5.57□□□□□ -1.52
CD40P25942 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.57□□□□□ -1.52
CD40P25942 VN1R84P-201ENST00000593697 235 ntBASIC5.57□□□□□ -1.52
CD40P25942 SMIM12P1-201ENST00000603004 274 ntBASIC5.57□□□□□ -1.52
CD40P25942 MTCYBP22-201ENST00000603788 447 ntBASIC5.57□□□□□ -1.52
CD40P25942 AC091488.1-201ENST00000604239 660 ntBASIC5.57□□□□□ -1.52
CD40P25942 AC073046.2-201ENST00000604756 527 ntBASIC5.57□□□□□ -1.52
CD40P25942 AC092354.1-201ENST00000606057 376 ntBASIC5.57□□□□□ -1.52
CD40P25942 AL031775.1-201ENST00000607014 887 ntBASIC5.57□□□□□ -1.52
CD40P25942 SNORA74.4-201ENST00000607595 199 ntBASIC5.57□□□□□ -1.52
CD40P25942 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CD40P25942 AC099842.1-201ENST00000619919 596 ntBASIC5.57□□□□□ -1.52
CD40P25942 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.57□□□□□ -1.52
CD40P25942 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CD40P25942 AC073592.6-201ENST00000624271 415 ntBASIC5.57□□□□□ -1.52
CD40P25942 AC073593.1-201ENST00000624500 411 ntBASIC5.57□□□□□ -1.52
CD40P25942 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
CD40P25942 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC5.57□□□□□ -1.52
CD40P25942 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CD40P25942 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CD40P25942 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC5.57□□□□□ -1.52
CD40P25942 AL161912.4-201ENST00000623889 2468 ntBASIC5.57□□□□□ -1.52
CD40P25942 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CD40P25942 OR2AH1P-202ENST00000641232 2744 ntBASIC5.57□□□□□ -1.52
CD40P25942 AC009120.2-204ENST00000621548 2032 ntBASIC5.57□□□□□ -1.52
CD40P25942 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CD40P25942 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CD40P25942 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CD40P25942 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CD40P25942 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CD40P25942 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CD40P25942 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.56□□□□□ -1.52
CD40P25942 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CD40P25942 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CD40P25942 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CD40P25942 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CD40P25942 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CD40P25942 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CD40P25942 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC5.56□□□□□ -1.52
CD40P25942 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CD40P25942 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CD40P25942 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CD40P25942 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.56□□□□□ -1.52
CD40P25942 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CD40P25942 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CD40P25942 SNORD16-201ENST00000362803 99 ntBASIC5.56□□□□□ -1.52
CD40P25942 YWHAZP6-201ENST00000399764 738 ntBASIC5.56□□□□□ -1.52
CD40P25942 CYCSP45-201ENST00000402289 315 ntBASIC5.56□□□□□ -1.52
CD40P25942 AL023284.3-201ENST00000407767 334 ntBASIC5.56□□□□□ -1.52
CD40P25942 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.56□□□□□ -1.52
CD40P25942 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.56□□□□□ -1.52
CD40P25942 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.56□□□□□ -1.52
CD40P25942 CYCSP52-201ENST00000422857 310 ntBASIC5.56□□□□□ -1.52
CD40P25942 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CD40P25942 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.52
CD40P25942 AL157884.1-201ENST00000424561 454 ntBASIC5.56□□□□□ -1.52
CD40P25942 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.56□□□□□ -1.52
CD40P25942 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC5.56□□□□□ -1.52
CD40P25942 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.56□□□□□ -1.52
CD40P25942 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.56□□□□□ -1.52
CD40P25942 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.56□□□□□ -1.52
CD40P25942 AC004865.1-201ENST00000442276 1003 ntBASIC5.56□□□□□ -1.52
CD40P25942 COX6CP2-201ENST00000444980 225 ntBASIC5.56□□□□□ -1.52
CD40P25942 POU5F1P5-201ENST00000445059 658 ntBASIC5.56□□□□□ -1.52
CD40P25942 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.56□□□□□ -1.52
CD40P25942 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.56□□□□□ -1.52
CD40P25942 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.56□□□□□ -1.52
CD40P25942 AC091965.3-201ENST00000506236 208 ntBASIC5.56□□□□□ -1.52
CD40P25942 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.56□□□□□ -1.52
CD40P25942 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.56□□□□□ -1.52
CD40P25942 SUMO2P7-201ENST00000511179 285 ntBASIC5.56□□□□□ -1.52
CD40P25942 RPL7L1P13-201ENST00000511702 739 ntBASIC5.56□□□□□ -1.52
CD40P25942 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.56□□□□□ -1.52
CD40P25942 MTCO1P30-201ENST00000515244 580 ntBASIC5.56□□□□□ -1.52
CD40P25942 AC011853.1-201ENST00000518911 454 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms