Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 AL136116.2-201ENST00000404020 785 ntBASIC4.71□□□□□ -1.66
SDC1P18827 MIR1286-201ENST00000408112 78 ntBASIC4.71□□□□□ -1.66
SDC1P18827 SNORA11.5-201ENST00000408163 128 ntBASIC4.71□□□□□ -1.66
SDC1P18827 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.71□□□□□ -1.66
SDC1P18827 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.71□□□□□ -1.66
SDC1P18827 CKS1BP6-201ENST00000424932 240 ntBASIC4.71□□□□□ -1.66
SDC1P18827 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.71□□□□□ -1.66
SDC1P18827 AC092162.1-201ENST00000432828 434 ntBASIC4.71□□□□□ -1.66
SDC1P18827 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.71□□□□□ -1.66
SDC1P18827 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.71□□□□□ -1.66
SDC1P18827 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.71□□□□□ -1.66
SDC1P18827 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.71□□□□□ -1.66
SDC1P18827 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.71□□□□□ -1.66
SDC1P18827 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.71□□□□□ -1.66
SDC1P18827 HMGN2P25-201ENST00000486956 268 ntBASIC4.71□□□□□ -1.66
SDC1P18827 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SDC1P18827 COX6B1P5-201ENST00000509843 249 ntBASIC4.71□□□□□ -1.66
SDC1P18827 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.71□□□□□ -1.66
SDC1P18827 OR7E128P-201ENST00000532736 1024 ntBASIC4.71□□□□□ -1.66
SDC1P18827 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.71□□□□□ -1.66
SDC1P18827 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SDC1P18827 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.71□□□□□ -1.66
SDC1P18827 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.71□□□□□ -1.66
SDC1P18827 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.71□□□□□ -1.66
SDC1P18827 AC012146.2-201ENST00000576545 416 ntBASIC4.71□□□□□ -1.66
SDC1P18827 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.71□□□□□ -1.66
SDC1P18827 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.71□□□□□ -1.66
SDC1P18827 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.71□□□□□ -1.66
SDC1P18827 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SDC1P18827 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.71□□□□□ -1.66
SDC1P18827 AC015871.5-202ENST00000623252 701 ntBASIC4.71□□□□□ -1.66
SDC1P18827 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SDC1P18827 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.71□□□□□ -1.66
SDC1P18827 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SDC1P18827 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SDC1P18827 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.71□□□□□ -1.66
SDC1P18827 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SDC1P18827 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SDC1P18827 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SDC1P18827 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SDC1P18827 AC112255.1-201ENST00000624070 2493 ntBASIC4.7□□□□□ -1.66
SDC1P18827 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SDC1P18827 CDC27P2-201ENST00000425026 1922 ntBASIC4.7□□□□□ -1.66
SDC1P18827 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.7□□□□□ -1.66
SDC1P18827 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SDC1P18827 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SDC1P18827 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SDC1P18827 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SDC1P18827 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SDC1P18827 AC008549.2-201ENST00000333482 706 ntBASIC4.7□□□□□ -1.66
SDC1P18827 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SDC1P18827 AL391361.1-201ENST00000405580 489 ntBASIC4.7□□□□□ -1.66
SDC1P18827 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.7□□□□□ -1.66
SDC1P18827 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.7□□□□□ -1.66
SDC1P18827 RPS26P4-201ENST00000431743 355 ntBASIC4.7□□□□□ -1.66
SDC1P18827 RHOT1P3-201ENST00000436571 331 ntBASIC4.7□□□□□ -1.66
SDC1P18827 NDUFA5P8-201ENST00000449019 346 ntBASIC4.7□□□□□ -1.66
SDC1P18827 AL606490.1-201ENST00000452266 765 ntBASIC4.7□□□□□ -1.66
SDC1P18827 RN7SL222P-201ENST00000476452 299 ntBASIC4.7□□□□□ -1.66
SDC1P18827 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SDC1P18827 AC072052.1-201ENST00000496556 306 ntBASIC4.7□□□□□ -1.66
SDC1P18827 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.7□□□□□ -1.66
SDC1P18827 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.7□□□□□ -1.66
SDC1P18827 AL390334.1-201ENST00000556395 450 ntBASIC4.7□□□□□ -1.66
SDC1P18827 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SDC1P18827 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.7□□□□□ -1.66
SDC1P18827 AC011447.4-201ENST00000587562 111 ntBASIC4.7□□□□□ -1.66
SDC1P18827 AC011445.2-201ENST00000599274 173 ntBASIC4.7□□□□□ -1.66
SDC1P18827 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.7□□□□□ -1.66
SDC1P18827 AC087783.2-201ENST00000605070 562 ntBASIC4.7□□□□□ -1.66
SDC1P18827 AP000864.1-201ENST00000609424 650 ntBASIC4.7□□□□□ -1.66
SDC1P18827 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.7□□□□□ -1.66
SDC1P18827 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.7□□□□□ -1.66
SDC1P18827 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.7□□□□□ -1.66
SDC1P18827 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.7□□□□□ -1.66
SDC1P18827 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SDC1P18827 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SDC1P18827 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SDC1P18827 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
SDC1P18827 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SDC1P18827 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SDC1P18827 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SDC1P18827 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SDC1P18827 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
SDC1P18827 PABPC1P6-201ENST00000445594 1829 ntBASIC4.69□□□□□ -1.66
SDC1P18827 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SDC1P18827 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SDC1P18827 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
SDC1P18827 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SDC1P18827 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SDC1P18827 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SDC1P18827 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SDC1P18827 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
SDC1P18827 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SDC1P18827 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SDC1P18827 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.69□□□□□ -1.66
SDC1P18827 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SDC1P18827 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SDC1P18827 RNU6-670P-201ENST00000364312 104 ntBASIC4.69□□□□□ -1.66
SDC1P18827 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms