Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 RPL7L1P4-201ENST00000513004 707 ntBASIC5.12□□□□□ -1.59
CDH1P12830 RNU6-1334P-201ENST00000516032 105 ntBASIC5.12□□□□□ -1.59
CDH1P12830 RNU6-1102P-201ENST00000516149 96 ntBASIC5.12□□□□□ -1.59
CDH1P12830 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH1P12830 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH1P12830 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH1P12830 IGKV2-18-201ENST00000522607 343 ntBASIC5.12□□□□□ -1.59
CDH1P12830 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.12□□□□□ -1.59
CDH1P12830 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.12□□□□□ -1.59
CDH1P12830 AL133247.2-201ENST00000603236 482 ntBASIC5.12□□□□□ -1.59
CDH1P12830 AC009269.6-201ENST00000621778 588 ntBASIC5.12□□□□□ -1.59
CDH1P12830 AC079298.2-201ENST00000623885 459 ntBASIC5.12□□□□□ -1.59
CDH1P12830 CYP4F35P-202ENST00000636121 390 ntBASIC5.12□□□□□ -1.59
CDH1P12830 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CDH1P12830 AC114947.2-201ENST00000565748 2125 ntBASIC5.12□□□□□ -1.59
CDH1P12830 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDH1P12830 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.12□□□□□ -1.59
CDH1P12830 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDH1P12830 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.12□□□□□ -1.59
CDH1P12830 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.12□□□□□ -1.59
CDH1P12830 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDH1P12830 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH1P12830 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH1P12830 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
CDH1P12830 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH1P12830 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH1P12830 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH1P12830 AP001642.1-201ENST00000624727 2117 ntBASIC5.11□□□□□ -1.59
CDH1P12830 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH1P12830 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
CDH1P12830 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDH1P12830 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
CDH1P12830 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDH1P12830 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH1P12830 MIR365B-201ENST00000362317 111 ntBASIC5.11□□□□□ -1.59
CDH1P12830 RN7SKP162-201ENST00000363605 345 ntBASIC5.11□□□□□ -1.59
CDH1P12830 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CDH1P12830 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.11□□□□□ -1.59
CDH1P12830 AC098592.2-201ENST00000413158 265 ntBASIC5.11□□□□□ -1.59
CDH1P12830 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH1P12830 AL121882.1-201ENST00000422893 417 ntBASIC5.11□□□□□ -1.59
CDH1P12830 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH1P12830 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH1P12830 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH1P12830 ARL5AP3-201ENST00000439327 386 ntBASIC5.11□□□□□ -1.59
CDH1P12830 RPL31P20-201ENST00000449593 360 ntBASIC5.11□□□□□ -1.59
CDH1P12830 ATP5G1P3-201ENST00000463301 410 ntBASIC5.11□□□□□ -1.59
CDH1P12830 AC135999.1-201ENST00000478962 479 ntBASIC5.11□□□□□ -1.59
CDH1P12830 RPS4XP1-201ENST00000482189 787 ntBASIC5.11□□□□□ -1.59
CDH1P12830 UBA52P7-201ENST00000486088 380 ntBASIC5.11□□□□□ -1.59
CDH1P12830 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH1P12830 AC022133.1-201ENST00000490961 571 ntBASIC5.11□□□□□ -1.59
CDH1P12830 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH1P12830 AC010468.3-201ENST00000508225 458 ntBASIC5.11□□□□□ -1.59
CDH1P12830 ATP5LP3-201ENST00000514223 304 ntBASIC5.11□□□□□ -1.59
CDH1P12830 SCARNA1-201ENST00000517138 166 ntBASIC5.11□□□□□ -1.59
CDH1P12830 RNA5SP373-201ENST00000517271 95 ntBASIC5.11□□□□□ -1.59
CDH1P12830 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH1P12830 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH1P12830 VTA1P2-201ENST00000520205 911 ntBASIC5.11□□□□□ -1.59
CDH1P12830 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH1P12830 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CDH1P12830 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH1P12830 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.11□□□□□ -1.59
CDH1P12830 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH1P12830 OR1AB1P-201ENST00000585564 761 ntBASIC5.11□□□□□ -1.59
CDH1P12830 HMGB1P51-201ENST00000605166 638 ntBASIC5.11□□□□□ -1.59
CDH1P12830 AL139407.1-201ENST00000613826 1175 ntBASIC5.11□□□□□ -1.59
CDH1P12830 MIR6729-201ENST00000618194 65 ntBASIC5.11□□□□□ -1.59
CDH1P12830 AC097460.3-201ENST00000623099 442 ntBASIC5.11□□□□□ -1.59
CDH1P12830 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH1P12830 AC074101.1-201ENST00000637861 241 ntBASIC5.11□□□□□ -1.59
CDH1P12830 AC009452.1-201ENST00000640823 606 ntBASIC5.11□□□□□ -1.59
CDH1P12830 OR55B1P-203ENST00000641518 2602 ntBASIC5.11□□□□□ -1.59
CDH1P12830 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDH1P12830 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH1P12830 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDH1P12830 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH1P12830 CDY11P-201ENST00000447168 1651 ntBASIC5.11□□□□□ -1.59
CDH1P12830 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH1P12830 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDH1P12830 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH1P12830 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDH1P12830 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH1P12830 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDH1P12830 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH1P12830 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDH1P12830 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDH1P12830 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDH1P12830 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.1□□□□□ -1.59
CDH1P12830 RNU6-609P-201ENST00000365459 107 ntBASIC5.1□□□□□ -1.59
CDH1P12830 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDH1P12830 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CDH1P12830 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDH1P12830 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDH1P12830 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDH1P12830 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH1P12830 MTND4P11-201ENST00000417020 1058 ntBASIC5.1□□□□□ -1.59
CDH1P12830 VN1R31P-201ENST00000417498 730 ntBASIC5.1□□□□□ -1.59
CDH1P12830 OR6C64P-201ENST00000419708 825 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms