Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.31□□□□□ -1.56
KRT3P12035 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
KRT3P12035 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRT3P12035 SNORA51.1-201ENST00000363243 140 ntBASIC5.31□□□□□ -1.56
KRT3P12035 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRT3P12035 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.31□□□□□ -1.56
KRT3P12035 U3.36-201ENST00000408418 213 ntBASIC5.31□□□□□ -1.56
KRT3P12035 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.31□□□□□ -1.56
KRT3P12035 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.31□□□□□ -1.56
KRT3P12035 AC104333.2-201ENST00000422630 192 ntBASIC5.31□□□□□ -1.56
KRT3P12035 TXNP5-201ENST00000441043 315 ntBASIC5.31□□□□□ -1.56
KRT3P12035 MRPL35P2-201ENST00000448009 511 ntBASIC5.31□□□□□ -1.56
KRT3P12035 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
KRT3P12035 RPS18P6-201ENST00000476880 458 ntBASIC5.31□□□□□ -1.56
KRT3P12035 RN7SKP260-201ENST00000516907 149 ntBASIC5.31□□□□□ -1.56
KRT3P12035 AC105031.1-201ENST00000518550 476 ntBASIC5.31□□□□□ -1.56
KRT3P12035 AP001804.2-201ENST00000533932 910 ntBASIC5.31□□□□□ -1.56
KRT3P12035 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.31□□□□□ -1.56
KRT3P12035 MIR4472-2-201ENST00000582069 67 ntBASIC5.31□□□□□ -1.56
KRT3P12035 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.31□□□□□ -1.56
KRT3P12035 AC011447.4-201ENST00000587562 111 ntBASIC5.31□□□□□ -1.56
KRT3P12035 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.31□□□□□ -1.56
KRT3P12035 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.31□□□□□ -1.56
KRT3P12035 AL158062.1-201ENST00000619632 745 ntBASIC5.31□□□□□ -1.56
KRT3P12035 MIR6886-201ENST00000619864 61 ntBASIC5.31□□□□□ -1.56
KRT3P12035 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.31□□□□□ -1.56
KRT3P12035 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.31□□□□□ -1.56
KRT3P12035 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
KRT3P12035 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
KRT3P12035 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
KRT3P12035 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
KRT3P12035 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
KRT3P12035 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
KRT3P12035 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.31□□□□□ -1.56
KRT3P12035 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRT3P12035 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
KRT3P12035 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRT3P12035 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
KRT3P12035 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRT3P12035 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.3□□□□□ -1.56
KRT3P12035 DHFRP5-201ENST00000406944 564 ntBASIC5.3□□□□□ -1.56
KRT3P12035 SNORA77-201ENST00000408716 125 ntBASIC5.3□□□□□ -1.56
KRT3P12035 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.3□□□□□ -1.56
KRT3P12035 NPM1P40-201ENST00000412758 733 ntBASIC5.3□□□□□ -1.56
KRT3P12035 OR6C64P-201ENST00000419708 825 ntBASIC5.3□□□□□ -1.56
KRT3P12035 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRT3P12035 RCC2P2-201ENST00000422174 918 ntBASIC5.3□□□□□ -1.56
KRT3P12035 DDX39BP1-205ENST00000422507 192 ntBASIC5.3□□□□□ -1.56
KRT3P12035 AL355433.1-201ENST00000422804 300 ntBASIC5.3□□□□□ -1.56
KRT3P12035 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.3□□□□□ -1.56
KRT3P12035 AL354714.3-201ENST00000447284 493 ntBASIC5.3□□□□□ -1.56
KRT3P12035 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.3□□□□□ -1.56
KRT3P12035 AURKAPS1-201ENST00000451805 1212 ntBASIC5.3□□□□□ -1.56
KRT3P12035 RPS26P39-201ENST00000469206 341 ntBASIC5.3□□□□□ -1.56
KRT3P12035 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.3□□□□□ -1.56
KRT3P12035 AC010350.1-201ENST00000504908 231 ntBASIC5.3□□□□□ -1.56
KRT3P12035 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.3□□□□□ -1.56
KRT3P12035 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.3□□□□□ -1.56
KRT3P12035 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.3□□□□□ -1.56
KRT3P12035 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.3□□□□□ -1.56
KRT3P12035 AC018442.3-201ENST00000523025 183 ntBASIC5.3□□□□□ -1.56
KRT3P12035 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.3□□□□□ -1.56
KRT3P12035 EIF4A2P5-201ENST00000529914 499 ntBASIC5.3□□□□□ -1.56
KRT3P12035 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.3□□□□□ -1.56
KRT3P12035 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.3□□□□□ -1.56
KRT3P12035 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.3□□□□□ -1.56
KRT3P12035 DUX4L52-201ENST00000549363 777 ntBASIC5.3□□□□□ -1.56
KRT3P12035 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.3□□□□□ -1.56
KRT3P12035 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.3□□□□□ -1.56
KRT3P12035 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.3□□□□□ -1.56
KRT3P12035 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.3□□□□□ -1.56
KRT3P12035 AL139407.1-201ENST00000613826 1175 ntBASIC5.3□□□□□ -1.56
KRT3P12035 MIR6826-201ENST00000617808 98 ntBASIC5.3□□□□□ -1.56
KRT3P12035 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.3□□□□□ -1.56
KRT3P12035 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.3□□□□□ -1.56
KRT3P12035 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
KRT3P12035 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRT3P12035 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRT3P12035 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRT3P12035 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.3□□□□□ -1.56
KRT3P12035 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
KRT3P12035 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
KRT3P12035 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRT3P12035 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
KRT3P12035 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.29□□□□□ -1.56
KRT3P12035 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRT3P12035 AC011447.7-201ENST00000624228 1590 ntBASIC5.29□□□□□ -1.56
KRT3P12035 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRT3P12035 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
KRT3P12035 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
KRT3P12035 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRT3P12035 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.29□□□□□ -1.56
KRT3P12035 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.29□□□□□ -1.56
KRT3P12035 NEAT1-202ENST00000501122 22743 ntBASIC5.29□□□□□ -1.56
KRT3P12035 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRT3P12035 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRT3P12035 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRT3P12035 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRT3P12035 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRT3P12035 NXF4-202ENST00000416098 1465 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms