Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXC6P09630 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXC6P09630 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXC6P09630 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.77□□□□□ -1.49
HOXC6P09630 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXC6P09630 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXC6P09630 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HOXC6P09630 AC026979.4-201ENST00000606555 645 ntBASIC5.77□□□□□ -1.49
HOXC6P09630 AC015802.5-201ENST00000607478 399 ntBASIC5.77□□□□□ -1.49
HOXC6P09630 AC110792.4-201ENST00000609843 298 ntBASIC5.77□□□□□ -1.49
HOXC6P09630 AC007786.3-201ENST00000615154 596 ntBASIC5.77□□□□□ -1.49
HOXC6P09630 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXC6P09630 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXC6P09630 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXC6P09630 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXC6P09630 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXC6P09630 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC6P09630 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.76□□□□□ -1.49
HOXC6P09630 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.76□□□□□ -1.49
HOXC6P09630 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC6P09630 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC6P09630 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
HOXC6P09630 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC6P09630 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.76□□□□□ -1.49
HOXC6P09630 OR1F12-201ENST00000402365 945 ntBASIC5.76□□□□□ -1.49
HOXC6P09630 AL021331.1-201ENST00000402817 582 ntBASIC5.76□□□□□ -1.49
HOXC6P09630 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC5.76□□□□□ -1.49
HOXC6P09630 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.76□□□□□ -1.49
HOXC6P09630 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.76□□□□□ -1.49
HOXC6P09630 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXC6P09630 CYCSP42-201ENST00000450823 238 ntBASIC5.76□□□□□ -1.49
HOXC6P09630 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXC6P09630 AL356390.1-201ENST00000455684 397 ntBASIC5.76□□□□□ -1.49
HOXC6P09630 RN7SL354P-201ENST00000469282 294 ntBASIC5.76□□□□□ -1.49
HOXC6P09630 HPRT1P1-201ENST00000509498 657 ntBASIC5.76□□□□□ -1.49
HOXC6P09630 AC010374.2-201ENST00000512933 535 ntBASIC5.76□□□□□ -1.49
HOXC6P09630 HMGN1P9-201ENST00000515212 298 ntBASIC5.76□□□□□ -1.49
HOXC6P09630 AC034205.1-201ENST00000520621 638 ntBASIC5.76□□□□□ -1.49
HOXC6P09630 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXC6P09630 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXC6P09630 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.76□□□□□ -1.49
HOXC6P09630 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.76□□□□□ -1.49
HOXC6P09630 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXC6P09630 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
HOXC6P09630 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXC6P09630 AC011626.1-201ENST00000604710 562 ntBASIC5.76□□□□□ -1.49
HOXC6P09630 AC008833.1-201ENST00000611633 691 ntBASIC5.76□□□□□ -1.49
HOXC6P09630 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXC6P09630 AC022306.3-201ENST00000619930 550 ntBASIC5.76□□□□□ -1.49
HOXC6P09630 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXC6P09630 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.76□□□□□ -1.49
HOXC6P09630 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.76□□□□□ -1.49
HOXC6P09630 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
HOXC6P09630 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
HOXC6P09630 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
HOXC6P09630 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
HOXC6P09630 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC6P09630 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC6P09630 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC6P09630 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC6P09630 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC6P09630 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC6P09630 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC6P09630 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC6P09630 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC6P09630 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC6P09630 AL356317.1-201ENST00000396110 1436 ntBASIC5.75□□□□□ -1.49
HOXC6P09630 OR51C1P-202ENST00000641159 1444 ntBASIC5.75□□□□□ -1.49
HOXC6P09630 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC6P09630 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
HOXC6P09630 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
HOXC6P09630 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.75□□□□□ -1.49
HOXC6P09630 SNORA70.6-201ENST00000383934 134 ntBASIC5.75□□□□□ -1.49
HOXC6P09630 GLULP6-201ENST00000399502 913 ntBASIC5.75□□□□□ -1.49
HOXC6P09630 SNORA11-201ENST00000408789 128 ntBASIC5.75□□□□□ -1.49
HOXC6P09630 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC5.75□□□□□ -1.49
HOXC6P09630 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC6P09630 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.75□□□□□ -1.49
HOXC6P09630 AC004074.1-201ENST00000421810 1063 ntBASIC5.75□□□□□ -1.49
HOXC6P09630 BX323845.1-201ENST00000432417 179 ntBASIC5.75□□□□□ -1.49
HOXC6P09630 AC093414.1-201ENST00000434712 514 ntBASIC5.75□□□□□ -1.49
HOXC6P09630 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC5.75□□□□□ -1.49
HOXC6P09630 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
HOXC6P09630 AC020779.1-201ENST00000478757 796 ntBASIC5.75□□□□□ -1.49
HOXC6P09630 RPS12P31-201ENST00000491419 398 ntBASIC5.75□□□□□ -1.49
HOXC6P09630 AC010350.1-201ENST00000504908 231 ntBASIC5.75□□□□□ -1.49
HOXC6P09630 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.75□□□□□ -1.49
HOXC6P09630 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.75□□□□□ -1.49
HOXC6P09630 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC6P09630 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.75□□□□□ -1.49
HOXC6P09630 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.75□□□□□ -1.49
HOXC6P09630 AC130364.2-201ENST00000528639 604 ntBASIC5.75□□□□□ -1.49
HOXC6P09630 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.75□□□□□ -1.49
HOXC6P09630 AC009268.1-201ENST00000561352 1203 ntBASIC5.75□□□□□ -1.49
HOXC6P09630 AC022387.2-201ENST00000604050 448 ntBASIC5.75□□□□□ -1.49
HOXC6P09630 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.75□□□□□ -1.49
HOXC6P09630 AC090506.2-201ENST00000624521 419 ntBASIC5.75□□□□□ -1.49
HOXC6P09630 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
HOXC6P09630 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC6P09630 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms