Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.62□□□□□ -1.51
RB1P06400 BGLT3-201ENST00000564523 994 ntBASIC5.62□□□□□ -1.51
RB1P06400 MIR4270-201ENST00000581799 70 ntBASIC5.62□□□□□ -1.51
RB1P06400 AP004372.1-201ENST00000604842 844 ntBASIC5.62□□□□□ -1.51
RB1P06400 AC074140.1-201ENST00000621617 208 ntBASIC5.62□□□□□ -1.51
RB1P06400 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RB1P06400 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RB1P06400 AC024341.1-201ENST00000526444 1552 ntBASIC5.62□□□□□ -1.51
RB1P06400 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.62□□□□□ -1.51
RB1P06400 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.61□□□□□ -1.51
RB1P06400 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
RB1P06400 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
RB1P06400 AL359955.1-201ENST00000455242 3275 ntBASIC5.61□□□□□ -1.51
RB1P06400 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.61□□□□□ -1.51
RB1P06400 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RB1P06400 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RB1P06400 RNU1-32P-201ENST00000363937 159 ntBASIC5.61□□□□□ -1.51
RB1P06400 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RB1P06400 RNU6-40P-201ENST00000384254 107 ntBASIC5.61□□□□□ -1.51
RB1P06400 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RB1P06400 AL356967.1-201ENST00000406305 431 ntBASIC5.61□□□□□ -1.51
RB1P06400 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
RB1P06400 RNU2-50P-201ENST00000410494 143 ntBASIC5.61□□□□□ -1.51
RB1P06400 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.61□□□□□ -1.51
RB1P06400 MTND2P25-201ENST00000449028 610 ntBASIC5.61□□□□□ -1.51
RB1P06400 RBMY2TP-201ENST00000451162 947 ntBASIC5.61□□□□□ -1.51
RB1P06400 AL513533.1-201ENST00000453728 415 ntBASIC5.61□□□□□ -1.51
RB1P06400 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.61□□□□□ -1.51
RB1P06400 AL672167.3-201ENST00000465951 960 ntBASIC5.61□□□□□ -1.51
RB1P06400 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.61□□□□□ -1.51
RB1P06400 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.61□□□□□ -1.51
RB1P06400 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RB1P06400 SETP12-201ENST00000514068 805 ntBASIC5.61□□□□□ -1.51
RB1P06400 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.61□□□□□ -1.51
RB1P06400 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RB1P06400 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.61□□□□□ -1.51
RB1P06400 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RB1P06400 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.61□□□□□ -1.51
RB1P06400 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.61□□□□□ -1.51
RB1P06400 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.61□□□□□ -1.51
RB1P06400 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.61□□□□□ -1.51
RB1P06400 MIR4691-201ENST00000583764 85 ntBASIC5.61□□□□□ -1.51
RB1P06400 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.61□□□□□ -1.51
RB1P06400 AC005021.1-201ENST00000608730 355 ntBASIC5.61□□□□□ -1.51
RB1P06400 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RB1P06400 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RB1P06400 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RB1P06400 AP000346.3-201ENST00000622821 210 ntBASIC5.61□□□□□ -1.51
RB1P06400 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RB1P06400 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.61□□□□□ -1.51
RB1P06400 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.61□□□□□ -1.51
RB1P06400 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RB1P06400 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RB1P06400 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RB1P06400 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RB1P06400 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.61□□□□□ -1.51
RB1P06400 AC005005.4-201ENST00000623789 16698 ntBASIC5.6□□□□□ -1.51
RB1P06400 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RB1P06400 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RB1P06400 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RB1P06400 TTC39DP-201ENST00000416781 1688 ntBASIC5.6□□□□□ -1.51
RB1P06400 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RB1P06400 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RB1P06400 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RB1P06400 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RB1P06400 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.6□□□□□ -1.51
RB1P06400 GSTA12P-201ENST00000402398 508 ntBASIC5.6□□□□□ -1.51
RB1P06400 Z97832.1-201ENST00000402490 328 ntBASIC5.6□□□□□ -1.51
RB1P06400 AC009506.2-201ENST00000420635 840 ntBASIC5.6□□□□□ -1.51
RB1P06400 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.6□□□□□ -1.51
RB1P06400 EI24P4-201ENST00000423683 1078 ntBASIC5.6□□□□□ -1.51
RB1P06400 AC093084.1-201ENST00000424233 687 ntBASIC5.6□□□□□ -1.51
RB1P06400 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RB1P06400 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.6□□□□□ -1.51
RB1P06400 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.6□□□□□ -1.51
RB1P06400 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.6□□□□□ -1.51
RB1P06400 AC090602.1-201ENST00000469695 252 ntBASIC5.6□□□□□ -1.51
RB1P06400 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.6□□□□□ -1.51
RB1P06400 NDUFA5P9-201ENST00000472609 340 ntBASIC5.6□□□□□ -1.51
RB1P06400 AP000797.2-201ENST00000475768 606 ntBASIC5.6□□□□□ -1.51
RB1P06400 RPL5P22-201ENST00000480199 884 ntBASIC5.6□□□□□ -1.51
RB1P06400 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.6□□□□□ -1.51
RB1P06400 AC008897.1-201ENST00000494006 347 ntBASIC5.6□□□□□ -1.51
RB1P06400 AC140172.1-201ENST00000502928 141 ntBASIC5.6□□□□□ -1.51
RB1P06400 AC093770.1-201ENST00000511559 571 ntBASIC5.6□□□□□ -1.51
RB1P06400 IGKV1-32-201ENST00000519290 311 ntBASIC5.6□□□□□ -1.51
RB1P06400 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.6□□□□□ -1.51
RB1P06400 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.6□□□□□ -1.51
RB1P06400 AP000859.1-201ENST00000525536 307 ntBASIC5.6□□□□□ -1.51
RB1P06400 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.6□□□□□ -1.51
RB1P06400 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.6□□□□□ -1.51
RB1P06400 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.6□□□□□ -1.51
RB1P06400 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.6□□□□□ -1.51
RB1P06400 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.6□□□□□ -1.51
RB1P06400 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.6□□□□□ -1.51
RB1P06400 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.6□□□□□ -1.51
RB1P06400 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.6□□□□□ -1.51
RB1P06400 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.6□□□□□ -1.51
RB1P06400 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.6□□□□□ -1.51
RB1P06400 OR4H6P-202ENST00000603819 340 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms