Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.26□□□□□ -1.57
PDGFBP01127 RNA5SP43-201ENST00000516559 110 ntBASIC5.26□□□□□ -1.57
PDGFBP01127 MORF4L1P3-201ENST00000525966 950 ntBASIC5.26□□□□□ -1.57
PDGFBP01127 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.26□□□□□ -1.57
PDGFBP01127 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.26□□□□□ -1.57
PDGFBP01127 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.26□□□□□ -1.57
PDGFBP01127 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PDGFBP01127 AC027281.1-201ENST00000574178 758 ntBASIC5.26□□□□□ -1.57
PDGFBP01127 MIR3160-1-201ENST00000577972 85 ntBASIC5.26□□□□□ -1.57
PDGFBP01127 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.26□□□□□ -1.57
PDGFBP01127 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PDGFBP01127 MIR92B-201ENST00000607575 96 ntBASIC5.26□□□□□ -1.57
PDGFBP01127 AC015722.2-201ENST00000622210 551 ntBASIC5.26□□□□□ -1.57
PDGFBP01127 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.26□□□□□ -1.57
PDGFBP01127 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.26□□□□□ -1.57
PDGFBP01127 AC015799.1-201ENST00000622996 3122 ntBASIC5.26□□□□□ -1.57
PDGFBP01127 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.26□□□□□ -1.57
PDGFBP01127 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFBP01127 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
PDGFBP01127 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
PDGFBP01127 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFBP01127 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDGFBP01127 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDGFBP01127 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.25□□□□□ -1.57
PDGFBP01127 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDGFBP01127 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDGFBP01127 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.25□□□□□ -1.57
PDGFBP01127 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDGFBP01127 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
PDGFBP01127 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PDGFBP01127 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
PDGFBP01127 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDGFBP01127 IGKV7-3-201ENST00000357453 298 ntBASIC5.25□□□□□ -1.57
PDGFBP01127 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.25□□□□□ -1.57
PDGFBP01127 RNU4-39P-201ENST00000362455 127 ntBASIC5.25□□□□□ -1.57
PDGFBP01127 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PDGFBP01127 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDGFBP01127 RPS3AP23-201ENST00000401762 784 ntBASIC5.25□□□□□ -1.57
PDGFBP01127 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.25□□□□□ -1.57
PDGFBP01127 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.25□□□□□ -1.57
PDGFBP01127 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.25□□□□□ -1.57
PDGFBP01127 AL359265.2-201ENST00000434367 631 ntBASIC5.25□□□□□ -1.57
PDGFBP01127 AL137845.2-201ENST00000444292 988 ntBASIC5.25□□□□□ -1.57
PDGFBP01127 TDGF1P1-201ENST00000445734 527 ntBASIC5.25□□□□□ -1.57
PDGFBP01127 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.25□□□□□ -1.57
PDGFBP01127 AC010326.1-201ENST00000462726 602 ntBASIC5.25□□□□□ -1.57
PDGFBP01127 AC011005.3-201ENST00000491624 395 ntBASIC5.25□□□□□ -1.57
PDGFBP01127 GAPDHP56-201ENST00000506031 988 ntBASIC5.25□□□□□ -1.57
PDGFBP01127 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.25□□□□□ -1.57
PDGFBP01127 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.25□□□□□ -1.57
PDGFBP01127 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.25□□□□□ -1.57
PDGFBP01127 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.25□□□□□ -1.57
PDGFBP01127 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.25□□□□□ -1.57
PDGFBP01127 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.25□□□□□ -1.57
PDGFBP01127 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.25□□□□□ -1.57
PDGFBP01127 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.25□□□□□ -1.57
PDGFBP01127 AC020915.5-201ENST00000596836 964 ntBASIC5.25□□□□□ -1.57
PDGFBP01127 AL512782.1-201ENST00000603093 364 ntBASIC5.25□□□□□ -1.57
PDGFBP01127 AC105254.2-201ENST00000603636 436 ntBASIC5.25□□□□□ -1.57
PDGFBP01127 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.25□□□□□ -1.57
PDGFBP01127 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.25□□□□□ -1.57
PDGFBP01127 AL121873.1-201ENST00000616013 524 ntBASIC5.25□□□□□ -1.57
PDGFBP01127 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.25□□□□□ -1.57
PDGFBP01127 AC073869.8-201ENST00000641806 335 ntBASIC5.25□□□□□ -1.57
PDGFBP01127 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDGFBP01127 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDGFBP01127 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDGFBP01127 AC093849.1-201ENST00000563631 2209 ntBASIC5.25□□□□□ -1.57
PDGFBP01127 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDGFBP01127 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
PDGFBP01127 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDGFBP01127 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
PDGFBP01127 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.25□□□□□ -1.57
PDGFBP01127 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.25□□□□□ -1.57
PDGFBP01127 AC016745.2-201ENST00000608834 3443 ntBASIC5.25□□□□□ -1.57
PDGFBP01127 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.25□□□□□ -1.57
PDGFBP01127 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDGFBP01127 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFBP01127 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFBP01127 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.24□□□□□ -1.57
PDGFBP01127 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFBP01127 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFBP01127 AC010928.1-201ENST00000592477 1447 ntBASIC5.24□□□□□ -1.57
PDGFBP01127 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFBP01127 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFBP01127 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFBP01127 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PDGFBP01127 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.24□□□□□ -1.57
PDGFBP01127 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PDGFBP01127 RNA5SP90-201ENST00000364801 99 ntBASIC5.24□□□□□ -1.57
PDGFBP01127 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.24□□□□□ -1.57
PDGFBP01127 RPL5P19-201ENST00000404228 893 ntBASIC5.24□□□□□ -1.57
PDGFBP01127 RN7SKP100-201ENST00000411258 284 ntBASIC5.24□□□□□ -1.57
PDGFBP01127 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.24□□□□□ -1.57
PDGFBP01127 AC007559.1-201ENST00000428736 355 ntBASIC5.24□□□□□ -1.57
PDGFBP01127 AL365220.1-201ENST00000432923 399 ntBASIC5.24□□□□□ -1.57
PDGFBP01127 RPS29P10-201ENST00000439197 166 ntBASIC5.24□□□□□ -1.57
PDGFBP01127 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFBP01127 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.24□□□□□ -1.57
PDGFBP01127 RNU6-775P-201ENST00000459318 96 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms