Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 MTCO2P11-201ENST00000431069 680 ntBASIC6.9□□□□□ -1.3
SOX1O00570 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC6.9□□□□□ -1.3
SOX1O00570 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC6.9□□□□□ -1.3
SOX1O00570 RN7SL834P-201ENST00000461450 286 ntBASIC6.9□□□□□ -1.3
SOX1O00570 KLF3P2-201ENST00000465138 268 ntBASIC6.9□□□□□ -1.3
SOX1O00570 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC6.9□□□□□ -1.3
SOX1O00570 AC093267.1-201ENST00000489176 961 ntBASIC6.9□□□□□ -1.3
SOX1O00570 AC108693.1-201ENST00000496068 432 ntBASIC6.9□□□□□ -1.3
SOX1O00570 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC6.9□□□□□ -1.3
SOX1O00570 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC6.9□□□□□ -1.3
SOX1O00570 HMGB1P44-201ENST00000508597 572 ntBASIC6.9□□□□□ -1.3
SOX1O00570 OR4D12P-201ENST00000509361 911 ntBASIC6.9□□□□□ -1.3
SOX1O00570 AC146944.3-201ENST00000509969 371 ntBASIC6.9□□□□□ -1.3
SOX1O00570 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC6.9□□□□□ -1.3
SOX1O00570 AC130365.2-201ENST00000525882 1201 ntBASIC6.9□□□□□ -1.3
SOX1O00570 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC6.9□□□□□ -1.3
SOX1O00570 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.9□□□□□ -1.3
SOX1O00570 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.9□□□□□ -1.3
SOX1O00570 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
SOX1O00570 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.9□□□□□ -1.3
SOX1O00570 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.9□□□□□ -1.3
SOX1O00570 MIR4666A-201ENST00000580160 79 ntBASIC6.9□□□□□ -1.3
SOX1O00570 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC6.9□□□□□ -1.3
SOX1O00570 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.9□□□□□ -1.3
SOX1O00570 AC097467.4-201ENST00000605504 141 ntBASIC6.9□□□□□ -1.3
SOX1O00570 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.9□□□□□ -1.3
SOX1O00570 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
SOX1O00570 AC010133.1-201ENST00000615809 842 ntBASIC6.9□□□□□ -1.3
SOX1O00570 AC104260.1-201ENST00000616660 539 ntBASIC6.9□□□□□ -1.3
SOX1O00570 AC011815.3-201ENST00000624194 473 ntBASIC6.9□□□□□ -1.3
SOX1O00570 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC6.9□□□□□ -1.3
SOX1O00570 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.9□□□□□ -1.31
SOX1O00570 AC123769.2-201ENST00000624332 5984 ntBASIC6.9□□□□□ -1.31
SOX1O00570 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SOX1O00570 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.9□□□□□ -1.31
SOX1O00570 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.9□□□□□ -1.31
SOX1O00570 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.9□□□□□ -1.31
SOX1O00570 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.9□□□□□ -1.31
SOX1O00570 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
SOX1O00570 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SOX1O00570 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SOX1O00570 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
SOX1O00570 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC6.9□□□□□ -1.31
SOX1O00570 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SOX1O00570 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SOX1O00570 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SOX1O00570 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SOX1O00570 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC6.9□□□□□ -1.31
SOX1O00570 AL079343.1-201ENST00000572358 1771 ntBASIC6.9□□□□□ -1.31
SOX1O00570 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
SOX1O00570 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SOX1O00570 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.9□□□□□ -1.31
SOX1O00570 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SOX1O00570 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SOX1O00570 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC6.89□□□□□ -1.31
SOX1O00570 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.89□□□□□ -1.31
SOX1O00570 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SOX1O00570 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SOX1O00570 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SOX1O00570 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SOX1O00570 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SOX1O00570 SNORA4.1-201ENST00000364263 144 ntBASIC6.89□□□□□ -1.31
SOX1O00570 Y_RNA.256-201ENST00000364594 104 ntBASIC6.89□□□□□ -1.31
SOX1O00570 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
SOX1O00570 RNU4-31P-201ENST00000384211 141 ntBASIC6.89□□□□□ -1.31
SOX1O00570 MIR1277-201ENST00000408536 78 ntBASIC6.89□□□□□ -1.31
SOX1O00570 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.89□□□□□ -1.31
SOX1O00570 AL354890.1-201ENST00000413730 346 ntBASIC6.89□□□□□ -1.31
SOX1O00570 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.89□□□□□ -1.31
SOX1O00570 RBMY2KP-201ENST00000418221 992 ntBASIC6.89□□□□□ -1.31
SOX1O00570 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.89□□□□□ -1.31
SOX1O00570 RPL7P44-201ENST00000424827 742 ntBASIC6.89□□□□□ -1.31
SOX1O00570 CFL1P1-202ENST00000432948 411 ntBASIC6.89□□□□□ -1.31
SOX1O00570 AL512286.1-201ENST00000439244 400 ntBASIC6.89□□□□□ -1.31
SOX1O00570 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC6.89□□□□□ -1.31
SOX1O00570 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC6.89□□□□□ -1.31
SOX1O00570 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.89□□□□□ -1.31
SOX1O00570 OR6C5P-201ENST00000452388 923 ntBASIC6.89□□□□□ -1.31
SOX1O00570 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC6.89□□□□□ -1.31
SOX1O00570 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.89□□□□□ -1.31
SOX1O00570 RPS3AP17-201ENST00000472594 777 ntBASIC6.89□□□□□ -1.31
SOX1O00570 RPL34P33-201ENST00000486062 334 ntBASIC6.89□□□□□ -1.31
SOX1O00570 AC079382.1-201ENST00000493346 557 ntBASIC6.89□□□□□ -1.31
SOX1O00570 AC023424.2-201ENST00000493479 777 ntBASIC6.89□□□□□ -1.31
SOX1O00570 AL358832.1-201ENST00000497800 389 ntBASIC6.89□□□□□ -1.31
SOX1O00570 OR51K1P-201ENST00000510214 950 ntBASIC6.89□□□□□ -1.31
SOX1O00570 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC6.89□□□□□ -1.31
SOX1O00570 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC6.89□□□□□ -1.31
SOX1O00570 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC6.89□□□□□ -1.31
SOX1O00570 OR7K1P-201ENST00000546439 926 ntBASIC6.89□□□□□ -1.31
SOX1O00570 AC004217.3-201ENST00000551552 878 ntBASIC6.89□□□□□ -1.31
SOX1O00570 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.89□□□□□ -1.31
SOX1O00570 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.89□□□□□ -1.31
SOX1O00570 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.89□□□□□ -1.31
SOX1O00570 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC6.89□□□□□ -1.31
SOX1O00570 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC6.89□□□□□ -1.31
SOX1O00570 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.89□□□□□ -1.31
SOX1O00570 AL445222.1-201ENST00000607259 628 ntBASIC6.89□□□□□ -1.31
SOX1O00570 AP005137.2-201ENST00000609238 400 ntBASIC6.89□□□□□ -1.31
SOX1O00570 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms