Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
RFXAPO00287 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RFXAPO00287 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
RFXAPO00287 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RFXAPO00287 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RFXAPO00287 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.38□□□□□ -1.39
RFXAPO00287 AC010329.1-201ENST00000593903 8328 ntBASIC6.38□□□□□ -1.39
RFXAPO00287 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
RFXAPO00287 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RFXAPO00287 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RFXAPO00287 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RFXAPO00287 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RFXAPO00287 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.37□□□□□ -1.39
RFXAPO00287 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.37□□□□□ -1.39
RFXAPO00287 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.37□□□□□ -1.39
RFXAPO00287 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC6.37□□□□□ -1.39
RFXAPO00287 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
RFXAPO00287 AL049634.1-201ENST00000453770 1720 ntBASIC6.37□□□□□ -1.39
RFXAPO00287 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.37□□□□□ -1.39
RFXAPO00287 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.37□□□□□ -1.39
RFXAPO00287 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RFXAPO00287 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RFXAPO00287 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFXAPO00287 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RFXAPO00287 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFXAPO00287 RNU6-1005P-201ENST00000384519 107 ntBASIC6.37□□□□□ -1.39
RFXAPO00287 AL590084.1-201ENST00000407885 387 ntBASIC6.37□□□□□ -1.39
RFXAPO00287 GLS-204ENST00000409428 816 ntTSL 2 BASIC6.37□□□□□ -1.39
RFXAPO00287 MOB4-205ENST00000409916 829 ntTSL 3 BASIC6.37□□□□□ -1.39
RFXAPO00287 RN7SKP279-201ENST00000411383 298 ntBASIC6.37□□□□□ -1.39
RFXAPO00287 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC6.37□□□□□ -1.39
RFXAPO00287 RPS15AP30-201ENST00000420976 390 ntBASIC6.37□□□□□ -1.39
RFXAPO00287 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RFXAPO00287 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.37□□□□□ -1.39
RFXAPO00287 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.37□□□□□ -1.39
RFXAPO00287 AC092017.2-201ENST00000427600 362 ntBASIC6.37□□□□□ -1.39
RFXAPO00287 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RFXAPO00287 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.37□□□□□ -1.39
RFXAPO00287 BX119904.1-201ENST00000432026 348 ntBASIC6.37□□□□□ -1.39
RFXAPO00287 AC009263.1-201ENST00000441193 1239 ntBASIC6.37□□□□□ -1.39
RFXAPO00287 AL118496.2-201ENST00000448300 230 ntBASIC6.37□□□□□ -1.39
RFXAPO00287 AC092967.1-201ENST00000449016 481 ntBASIC6.37□□□□□ -1.39
RFXAPO00287 ZNF114P1-201ENST00000453500 292 ntBASIC6.37□□□□□ -1.39
RFXAPO00287 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC6.37□□□□□ -1.39
RFXAPO00287 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC6.37□□□□□ -1.39
RFXAPO00287 AC108161.1-201ENST00000461060 402 ntBASIC6.37□□□□□ -1.39
RFXAPO00287 MTCO3P38-201ENST00000468910 766 ntBASIC6.37□□□□□ -1.39
RFXAPO00287 DEFB109A-201ENST00000482450 265 ntBASIC6.37□□□□□ -1.39
RFXAPO00287 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RFXAPO00287 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC6.37□□□□□ -1.39
RFXAPO00287 OR8I1P-201ENST00000529291 931 ntBASIC6.37□□□□□ -1.39
RFXAPO00287 AHI1-217ENST00000534469 680 ntTSL 3 BASIC6.37□□□□□ -1.39
RFXAPO00287 AL121766.1-201ENST00000547436 487 ntBASIC6.37□□□□□ -1.39
RFXAPO00287 AC087897.1-201ENST00000550134 156 ntBASIC6.37□□□□□ -1.39
RFXAPO00287 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC6.37□□□□□ -1.39
RFXAPO00287 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC6.37□□□□□ -1.39
RFXAPO00287 AC009101.1-201ENST00000568135 242 ntBASIC6.37□□□□□ -1.39
RFXAPO00287 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC6.37□□□□□ -1.39
RFXAPO00287 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC6.37□□□□□ -1.39
RFXAPO00287 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.37□□□□□ -1.39
RFXAPO00287 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.37□□□□□ -1.39
RFXAPO00287 MTCYBP22-201ENST00000603788 447 ntBASIC6.37□□□□□ -1.39
RFXAPO00287 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.37□□□□□ -1.39
RFXAPO00287 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.37□□□□□ -1.39
RFXAPO00287 AC008498.1-201ENST00000613012 531 ntBASIC6.37□□□□□ -1.39
RFXAPO00287 AC025253.1-201ENST00000613623 543 ntBASIC6.37□□□□□ -1.39
RFXAPO00287 AC009878.1-201ENST00000621819 340 ntBASIC6.37□□□□□ -1.39
RFXAPO00287 AC090617.9-201ENST00000623751 147 ntBASIC6.37□□□□□ -1.39
RFXAPO00287 AC089998.1-201ENST00000548575 3141 ntBASIC6.37□□□□□ -1.39
RFXAPO00287 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.37□□□□□ -1.39
RFXAPO00287 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.37□□□□□ -1.39
RFXAPO00287 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RFXAPO00287 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
RFXAPO00287 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
RFXAPO00287 AC009120.2-204ENST00000621548 2032 ntBASIC6.37□□□□□ -1.39
RFXAPO00287 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RFXAPO00287 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.36□□□□□ -1.39
RFXAPO00287 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.36□□□□□ -1.39
RFXAPO00287 AC005034.3-201ENST00000604845 1747 ntBASIC6.36□□□□□ -1.39
RFXAPO00287 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RFXAPO00287 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RFXAPO00287 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.36□□□□□ -1.39
RFXAPO00287 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.36□□□□□ -1.39
RFXAPO00287 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
RFXAPO00287 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.36□□□□□ -1.39
RFXAPO00287 AC006042.3-201ENST00000454684 1469 ntBASIC6.36□□□□□ -1.39
RFXAPO00287 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RFXAPO00287 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RFXAPO00287 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
RFXAPO00287 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RFXAPO00287 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RFXAPO00287 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RFXAPO00287 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
RFXAPO00287 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.36□□□□□ -1.39
RFXAPO00287 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC6.36□□□□□ -1.39
RFXAPO00287 RNA5SP507-201ENST00000363603 121 ntBASIC6.36□□□□□ -1.39
RFXAPO00287 RNU105B-201ENST00000364478 208 ntBASIC6.36□□□□□ -1.39
RFXAPO00287 RNA5SP478-201ENST00000364657 115 ntBASIC6.36□□□□□ -1.39
RFXAPO00287 Y_RNA.359-201ENST00000365498 102 ntBASIC6.36□□□□□ -1.39
RFXAPO00287 SNORD116.1-201ENST00000365628 92 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 262.7 ms