Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AL078599.1-201ENST00000402075 293 ntBASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 Z97832.1-201ENST00000402490 328 ntBASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AC091685.2-201ENST00000454924 864 ntBASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 GYG1P1-201ENST00000460864 698 ntBASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 NPM1P29-201ENST00000483112 803 ntBASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AC083982.1-201ENST00000485679 344 ntBASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AC002456.2-201ENST00000509356 380 ntBASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AC110775.1-201ENST00000513721 462 ntBASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AL390334.1-201ENST00000556395 450 ntBASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 NXF4-202ENST00000416098 1465 ntBASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 INTS6P1-201ENST00000504674 2530 ntBASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AC012078.1-201ENST00000405035 1646 ntBASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
TCRBV4S1A1TA0A5B7 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 UBBP2-201ENST00000376781 231 ntBASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 SNORA66-201ENST00000384792 133 ntBASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AL359643.1-201ENST00000404109 423 ntBASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 RN7SKP114-201ENST00000410327 279 ntBASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 EI24P4-201ENST00000423683 1078 ntBASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 RPL7AP61-201ENST00000443410 636 ntBASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AC020779.1-201ENST00000478757 796 ntBASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 RN7SL441P-201ENST00000492388 296 ntBASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 RNA5SP303-201ENST00000516192 130 ntBASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 CDH12P4-201ENST00000517835 295 ntBASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 CDH12P3-201ENST00000517935 295 ntBASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 CDH12P1-201ENST00000518435 295 ntBASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AP005131.7-201ENST00000610087 611 ntBASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 TET1P1-201ENST00000426627 2301 ntBASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TCRBV4S1A1TA0A5B7 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AC083843.3-201ENST00000623679 2186 ntBASIC4□□□□□ -1.77
TCRBV4S1A1TA0A5B7 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
TCRBV4S1A1TA0A5B7 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
TCRBV4S1A1TA0A5B7 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
TCRBV4S1A1TA0A5B7 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4□□□□□ -1.77
TCRBV4S1A1TA0A5B7 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
TCRBV4S1A1TA0A5B7 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4□□□□□ -1.77
TCRBV4S1A1TA0A5B7 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4□□□□□ -1.77
TCRBV4S1A1TA0A5B7 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4□□□□□ -1.77
TCRBV4S1A1TA0A5B7 RN7SKP113-201ENST00000363891 295 ntBASIC4□□□□□ -1.77
TCRBV4S1A1TA0A5B7 SNORA51.8-201ENST00000384234 132 ntBASIC4□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AL109941.1-201ENST00000401925 229 ntBASIC4□□□□□ -1.77
TCRBV4S1A1TA0A5B7 RBMY2KP-201ENST00000418221 992 ntBASIC4□□□□□ -1.77
TCRBV4S1A1TA0A5B7 RPL6P21-201ENST00000418672 846 ntBASIC4□□□□□ -1.77
TCRBV4S1A1TA0A5B7 RPS26P13-201ENST00000419030 330 ntBASIC4□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AC104837.2-201ENST00000427236 424 ntBASIC4□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4□□□□□ -1.77
TCRBV4S1A1TA0A5B7 NPM1P33-201ENST00000438918 872 ntBASIC4□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AL161722.1-201ENST00000446972 1032 ntBASIC4□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AL356981.1-201ENST00000454879 684 ntBASIC4□□□□□ -1.77
TCRBV4S1A1TA0A5B7 RPS3AP41-201ENST00000462701 778 ntBASIC4□□□□□ -1.77
TCRBV4S1A1TA0A5B7 RN7SL443P-201ENST00000464331 290 ntBASIC4□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4□□□□□ -1.77
TCRBV4S1A1TA0A5B7 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4□□□□□ -1.77
TCRBV4S1A1TA0A5B7 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms