Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 U3.23-201ENST00000391132 200 ntBASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 AL645927.1-201ENST00000396783 406 ntBASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 RPL35AP24-201ENST00000413846 330 ntBASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 AL590806.1-201ENST00000415818 853 ntBASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 LIPT1P1-201ENST00000415870 1186 ntBASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 DPPA2P2-201ENST00000418220 897 ntBASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 RPL23AP4-201ENST00000427757 463 ntBASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 RPL7L1P9-201ENST00000431298 745 ntBASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 AL731534.1-201ENST00000434711 269 ntBASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 EEF1B2P5-201ENST00000444820 548 ntBASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 Z83846.1-201ENST00000446798 265 ntBASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 AL096803.2-201ENST00000450032 677 ntBASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 SNORD11.1-201ENST00000459482 85 ntBASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 RPS20P4-201ENST00000461659 355 ntBASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 NDUFA5P12-201ENST00000503796 343 ntBASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 PRELID3BP5-201ENST00000508612 460 ntBASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 RN7SKP287-201ENST00000516546 266 ntBASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 RNU6-1308P-201ENST00000516817 103 ntBASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 HMGN2P6-201ENST00000551091 273 ntBASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 AC073387.2-201ENST00000604797 784 ntBASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 AC079610.2-201ENST00000604818 690 ntBASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 AC132068.1-201ENST00000623805 459 ntBASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 AL121950.1-201ENST00000624993 2077 ntBASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 AL355834.1-201ENST00000556602 3965 ntBASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.44□□□□□ -1.54
CCDC187A0A096LP49 MTCO1P7-201ENST00000419523 1542 ntBASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 AC140134.1-201ENST00000511830 3544 ntBASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 MT-RNR2-201ENST00000387347 1559 ntBASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 AC092070.2-203ENST00000598377 3644 ntBASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 AC007938.2-201ENST00000604666 2634 ntBASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 HMGB3P7-201ENST00000400214 611 ntBASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 RPL5P19-201ENST00000404228 893 ntBASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 RPL23AP27-201ENST00000415161 451 ntBASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 NANOGP5-201ENST00000424456 877 ntBASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 MRPS21P2-201ENST00000424704 264 ntBASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 HSPE1P16-201ENST00000426640 348 ntBASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 AC016027.5-201ENST00000427227 210 ntBASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.43□□□□□ -1.54
CCDC187A0A096LP49 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms