Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 RPS4XP5-201ENST00000419038 768 ntBASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 OR5M12P-201ENST00000423388 929 ntBASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 AC005033.1-201ENST00000428904 813 ntBASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 AC068135.1-201ENST00000446164 246 ntBASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 AC009220.1-201ENST00000451614 275 ntBASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 HIGD1AP8-201ENST00000453927 274 ntBASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 AZGP1P2-201ENST00000454506 345 ntBASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 RNU7-140P-201ENST00000459546 60 ntBASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 GYG1P1-201ENST00000460864 698 ntBASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 RPL5P23-201ENST00000496040 868 ntBASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 MTCO3P15-201ENST00000526563 574 ntBASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 HNRNPCP1-201ENST00000556181 766 ntBASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 AC009948.4-201ENST00000604692 675 ntBASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 TUSC7.1-201ENST00000610969 165 ntBASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 AC084782.3-201ENST00000612282 578 ntBASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 RAD17P2-201ENST00000451754 1977 ntBASIC6.65□□□□□ -1.34
PTCH2Q9Y6C5 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PTCH2Q9Y6C5 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.65□□□□□ -1.35
PTCH2Q9Y6C5 PABPC1P8-201ENST00000452851 2086 ntBASIC6.65□□□□□ -1.35
PTCH2Q9Y6C5 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.65□□□□□ -1.35
PTCH2Q9Y6C5 BIN2P1-201ENST00000504996 1530 ntBASIC6.65□□□□□ -1.35
PTCH2Q9Y6C5 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.65□□□□□ -1.35
PTCH2Q9Y6C5 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
PTCH2Q9Y6C5 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PTCH2Q9Y6C5 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
PTCH2Q9Y6C5 CCT8P1-201ENST00000413611 1657 ntBASIC6.65□□□□□ -1.35
PTCH2Q9Y6C5 AC110373.1-201ENST00000505994 3505 ntBASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 MIR320B1-201ENST00000390209 79 ntBASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 CASP3-203ENST00000393588 677 ntTSL 4 BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 AL136131.1-201ENST00000406079 803 ntBASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 ZDHHC20P2-201ENST00000424108 429 ntBASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 RPF2P1-201ENST00000424137 906 ntBASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 YWHAEP5-201ENST00000431545 765 ntBASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 GSTA7P-201ENST00000438425 448 ntBASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 AC009120.1-201ENST00000493458 473 ntBASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 MIR3189-201ENST00000578735 73 ntBASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 AC067852.5-201ENST00000589299 310 ntBASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 AC091193.1-201ENST00000604640 448 ntBASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 AL391261.1-201ENST00000555712 1479 ntBASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 AL359091.1-201ENST00000449048 1734 ntBASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PTCH2Q9Y6C5 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.63□□□□□ -1.35
PTCH2Q9Y6C5 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
PTCH2Q9Y6C5 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms