Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AL445670.1-201ENST00000618889 801 ntBASIC8.13□□□□□ -1.11
ZC3H4Q9UPT8 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC8.13□□□□□ -1.11
ZC3H4Q9UPT8 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC8.13□□□□□ -1.11
ZC3H4Q9UPT8 AC069234.4-201ENST00000621276 412 ntBASIC8.13□□□□□ -1.11
ZC3H4Q9UPT8 TSHZ2-205ENST00000626626 670 ntBASIC8.13□□□□□ -1.11
ZC3H4Q9UPT8 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC8.13□□□□□ -1.11
ZC3H4Q9UPT8 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC8.13□□□□□ -1.11
ZC3H4Q9UPT8 AC024614.3-201ENST00000637860 256 ntBASIC8.13□□□□□ -1.11
ZC3H4Q9UPT8 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
ZC3H4Q9UPT8 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
ZC3H4Q9UPT8 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
ZC3H4Q9UPT8 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
ZC3H4Q9UPT8 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
ZC3H4Q9UPT8 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
ZC3H4Q9UPT8 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
ZC3H4Q9UPT8 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
ZC3H4Q9UPT8 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
ZC3H4Q9UPT8 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC8.13□□□□□ -1.11
ZC3H4Q9UPT8 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC8.13□□□□□ -1.11
ZC3H4Q9UPT8 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC8.13□□□□□ -1.11
ZC3H4Q9UPT8 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
ZC3H4Q9UPT8 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC8.13□□□□□ -1.11
ZC3H4Q9UPT8 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
ZC3H4Q9UPT8 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
ZC3H4Q9UPT8 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
ZC3H4Q9UPT8 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
ZC3H4Q9UPT8 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
ZC3H4Q9UPT8 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
ZC3H4Q9UPT8 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 RNU6-621P-201ENST00000364752 109 ntBASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 RN7SKP47-201ENST00000365347 328 ntBASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 RPL17P12-201ENST00000413391 526 ntBASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 AC007742.1-201ENST00000425789 329 ntBASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 ELOCP14-201ENST00000428070 331 ntBASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 AL121916.1-201ENST00000429405 308 ntBASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 AL365184.2-201ENST00000431139 435 ntBASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 HMGB1P45-201ENST00000435986 653 ntBASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 ELOCP26-201ENST00000436067 329 ntBASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 AC073614.1-201ENST00000438690 650 ntBASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 ELOCP7-201ENST00000439968 331 ntBASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 RANP1-206ENST00000455094 651 ntBASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 RN7SL629P-201ENST00000489622 285 ntBASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 RN7SL187P-201ENST00000495587 303 ntBASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 SUMO2P4-201ENST00000504193 276 ntBASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 IGKV3D-25-201ENST00000519599 235 ntBASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 DPPA3P2-201ENST00000553589 478 ntBASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 AL162632.2-201ENST00000553933 399 ntBASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 BPTFP1-201ENST00000579209 492 ntBASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 UBE2V2P2-201ENST00000587677 504 ntBASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 CGA-206ENST00000630630 832 ntTSL 2 BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 OR52B5P-202ENST00000641118 1110 ntBASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 AC074141.1-201ENST00000588129 2995 ntBASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC8.12□□□□□ -1.11
ZC3H4Q9UPT8 AC073342.2-201ENST00000595842 1800 ntBASIC8.11□□□□□ -1.11
ZC3H4Q9UPT8 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
ZC3H4Q9UPT8 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC8.11□□□□□ -1.11
ZC3H4Q9UPT8 ENSAP3-201ENST00000312710 333 ntBASIC8.11□□□□□ -1.11
ZC3H4Q9UPT8 MTCYBP36-201ENST00000404146 440 ntBASIC8.11□□□□□ -1.11
ZC3H4Q9UPT8 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC8.11□□□□□ -1.11
ZC3H4Q9UPT8 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC8.11□□□□□ -1.11
ZC3H4Q9UPT8 OR5W1P-201ENST00000423705 938 ntBASIC8.11□□□□□ -1.11
ZC3H4Q9UPT8 RPL31P54-201ENST00000429803 370 ntBASIC8.11□□□□□ -1.11
ZC3H4Q9UPT8 FMO7P-201ENST00000436045 768 ntBASIC8.11□□□□□ -1.11
ZC3H4Q9UPT8 AC114755.4-201ENST00000439114 443 ntBASIC8.11□□□□□ -1.11
ZC3H4Q9UPT8 OR7E125P-201ENST00000443450 846 ntBASIC8.11□□□□□ -1.11
ZC3H4Q9UPT8 AC244505.5-201ENST00000443639 207 ntBASIC8.11□□□□□ -1.11
ZC3H4Q9UPT8 ARPC3P2-201ENST00000457786 533 ntBASIC8.11□□□□□ -1.11
ZC3H4Q9UPT8 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC8.11□□□□□ -1.11
ZC3H4Q9UPT8 DYNLL1P6-201ENST00000503440 264 ntBASIC8.11□□□□□ -1.11
ZC3H4Q9UPT8 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC8.11□□□□□ -1.11
ZC3H4Q9UPT8 AC024589.1-201ENST00000512207 263 ntBASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms