Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 AC002486.1-201ENST00000435098 391 ntBASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 AC005002.1-201ENST00000447458 540 ntBASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 AL591379.2-201ENST00000450223 397 ntBASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 AL355032.1-201ENST00000472981 438 ntBASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 RPL5P12-201ENST00000477071 851 ntBASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 SETP14-201ENST00000497538 873 ntBASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 THAP6-203ENST00000502620 582 ntTSL 3 BASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 SNX5P1-201ENST00000505757 1041 ntBASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 MRPS5P3-201ENST00000515577 166 ntBASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 RNU6-1170P-201ENST00000515974 106 ntBASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 AC239860.2-201ENST00000525886 270 ntBASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 OR6M3P-201ENST00000531567 700 ntBASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 FRG2IP-201ENST00000563581 781 ntBASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 RN7SL131P-201ENST00000579043 256 ntBASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 AC022884.3-201ENST00000579571 248 ntBASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 AC012507.3-201ENST00000603556 477 ntBASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 AC091488.1-201ENST00000604239 660 ntBASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 AC008385.1-201ENST00000604421 355 ntBASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 uc_338.5-201ENST00000611839 155 ntBASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 SAMMSON-222ENST00000641901 2727 ntBASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.15□□□□□ -1.26
CUEDC1Q9NWM3 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CUEDC1Q9NWM3 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CUEDC1Q9NWM3 AC123769.2-201ENST00000624332 5984 ntBASIC7.15□□□□□ -1.27
CUEDC1Q9NWM3 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC7.15□□□□□ -1.27
CUEDC1Q9NWM3 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
CUEDC1Q9NWM3 AC079178.2-201ENST00000439323 1624 ntBASIC7.15□□□□□ -1.27
CUEDC1Q9NWM3 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CUEDC1Q9NWM3 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CUEDC1Q9NWM3 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.15□□□□□ -1.27
CUEDC1Q9NWM3 AL391262.1-201ENST00000556558 1992 ntBASIC7.15□□□□□ -1.27
CUEDC1Q9NWM3 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
CUEDC1Q9NWM3 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.15□□□□□ -1.27
CUEDC1Q9NWM3 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC7.15□□□□□ -1.27
CUEDC1Q9NWM3 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 SNORA51.12-201ENST00000384448 134 ntBASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 AL139100.1-201ENST00000408001 498 ntBASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 RNU2-62P-201ENST00000410868 191 ntBASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 AC109780.2-201ENST00000413467 845 ntBASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 AC004690.1-201ENST00000418216 328 ntBASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 AL358176.2-201ENST00000425769 204 ntBASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 PSMD10P2-201ENST00000432890 672 ntBASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 PHB2P1-201ENST00000434943 890 ntBASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 FARSBP1-201ENST00000435808 1778 ntBASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 RPL7P11-201ENST00000437586 658 ntBASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 AL118496.1-201ENST00000440201 1812 ntBASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 AC006480.1-201ENST00000449887 378 ntBASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 FABP3P2-201ENST00000453169 399 ntBASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 AL354854.1-201ENST00000455940 1363 ntBASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 MTND5P22-201ENST00000458380 195 ntBASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 RN7SL870P-201ENST00000460111 296 ntBASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 AC096922.1-201ENST00000461635 651 ntBASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 AC090096.1-201ENST00000489168 390 ntBASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 AC122714.1-201ENST00000502510 459 ntBASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 AC092725.2-201ENST00000567658 1389 ntBASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 AC136618.2-201ENST00000575091 400 ntBASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 AC100830.2-201ENST00000581636 240 ntBASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 AC024085.1-201ENST00000604299 432 ntBASIC7.14□□□□□ -1.27
CUEDC1Q9NWM3 AL451049.1-201ENST00000608672 497 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms