Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AL078599.1-201ENST00000402075 293 ntBASIC5.27□□□□□ -1.57
SIX2Q9NPC8 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.27□□□□□ -1.57
SIX2Q9NPC8 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SIX2Q9NPC8 AC092162.1-201ENST00000432828 434 ntBASIC5.27□□□□□ -1.57
SIX2Q9NPC8 AC093414.1-201ENST00000434712 514 ntBASIC5.27□□□□□ -1.57
SIX2Q9NPC8 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC5.27□□□□□ -1.57
SIX2Q9NPC8 AL137845.2-201ENST00000444292 988 ntBASIC5.27□□□□□ -1.57
SIX2Q9NPC8 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.27□□□□□ -1.57
SIX2Q9NPC8 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.27□□□□□ -1.57
SIX2Q9NPC8 AL356390.1-201ENST00000455684 397 ntBASIC5.27□□□□□ -1.57
SIX2Q9NPC8 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.27□□□□□ -1.57
SIX2Q9NPC8 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.27□□□□□ -1.57
SIX2Q9NPC8 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.27□□□□□ -1.57
SIX2Q9NPC8 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.27□□□□□ -1.57
SIX2Q9NPC8 RNA5SP34-201ENST00000516887 130 ntBASIC5.27□□□□□ -1.57
SIX2Q9NPC8 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.27□□□□□ -1.57
SIX2Q9NPC8 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.27□□□□□ -1.57
SIX2Q9NPC8 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.27□□□□□ -1.57
SIX2Q9NPC8 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.27□□□□□ -1.57
SIX2Q9NPC8 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.27□□□□□ -1.57
SIX2Q9NPC8 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.27□□□□□ -1.57
SIX2Q9NPC8 TVP23CP2-201ENST00000571473 623 ntBASIC5.27□□□□□ -1.57
SIX2Q9NPC8 RN7SL435P-201ENST00000584418 282 ntBASIC5.27□□□□□ -1.57
SIX2Q9NPC8 AC092474.3-201ENST00000603022 568 ntBASIC5.27□□□□□ -1.57
SIX2Q9NPC8 AC010424.2-201ENST00000607594 443 ntBASIC5.27□□□□□ -1.57
SIX2Q9NPC8 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.27□□□□□ -1.57
SIX2Q9NPC8 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.27□□□□□ -1.57
SIX2Q9NPC8 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.27□□□□□ -1.57
SIX2Q9NPC8 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.27□□□□□ -1.57
SIX2Q9NPC8 CASC19-281ENST00000642118 1554 ntBASIC5.27□□□□□ -1.57
SIX2Q9NPC8 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
SIX2Q9NPC8 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SIX2Q9NPC8 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SIX2Q9NPC8 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.27□□□□□ -1.57
SIX2Q9NPC8 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SIX2Q9NPC8 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SIX2Q9NPC8 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.26□□□□□ -1.57
SIX2Q9NPC8 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SIX2Q9NPC8 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
SIX2Q9NPC8 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SIX2Q9NPC8 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
SIX2Q9NPC8 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.26□□□□□ -1.57
SIX2Q9NPC8 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.26□□□□□ -1.57
SIX2Q9NPC8 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.26□□□□□ -1.57
SIX2Q9NPC8 UBBP2-201ENST00000376781 231 ntBASIC5.26□□□□□ -1.57
SIX2Q9NPC8 NPM1P40-201ENST00000412758 733 ntBASIC5.26□□□□□ -1.57
SIX2Q9NPC8 GTF2IP5-201ENST00000414608 731 ntBASIC5.26□□□□□ -1.57
SIX2Q9NPC8 AL645608.4-201ENST00000423619 154 ntBASIC5.26□□□□□ -1.57
SIX2Q9NPC8 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.26□□□□□ -1.57
SIX2Q9NPC8 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.26□□□□□ -1.57
SIX2Q9NPC8 ZNF736P1Y-201ENST00000440402 1276 ntBASIC5.26□□□□□ -1.57
SIX2Q9NPC8 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SIX2Q9NPC8 AC020890.1-201ENST00000491837 504 ntBASIC5.26□□□□□ -1.57
SIX2Q9NPC8 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.26□□□□□ -1.57
SIX2Q9NPC8 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SIX2Q9NPC8 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.26□□□□□ -1.57
SIX2Q9NPC8 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.26□□□□□ -1.57
SIX2Q9NPC8 SNORA70.17-201ENST00000516449 133 ntBASIC5.26□□□□□ -1.57
SIX2Q9NPC8 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.26□□□□□ -1.57
SIX2Q9NPC8 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.26□□□□□ -1.57
SIX2Q9NPC8 AL049839.1-201ENST00000556151 657 ntBASIC5.26□□□□□ -1.57
SIX2Q9NPC8 ADAD1P2-201ENST00000588476 646 ntBASIC5.26□□□□□ -1.57
SIX2Q9NPC8 AC007423.1-201ENST00000605009 627 ntBASIC5.26□□□□□ -1.57
SIX2Q9NPC8 AL391262.2-201ENST00000622466 494 ntBASIC5.26□□□□□ -1.57
SIX2Q9NPC8 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.26□□□□□ -1.57
SIX2Q9NPC8 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SIX2Q9NPC8 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SIX2Q9NPC8 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SIX2Q9NPC8 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SIX2Q9NPC8 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SIX2Q9NPC8 SALL4P2-201ENST00000423288 2910 ntBASIC5.26□□□□□ -1.57
SIX2Q9NPC8 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SIX2Q9NPC8 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SIX2Q9NPC8 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SIX2Q9NPC8 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SIX2Q9NPC8 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.26□□□□□ -1.57
SIX2Q9NPC8 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.26□□□□□ -1.57
SIX2Q9NPC8 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SIX2Q9NPC8 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SIX2Q9NPC8 DDX18P5-201ENST00000534547 1306 ntBASIC5.25□□□□□ -1.57
SIX2Q9NPC8 AL034370.1-201ENST00000397254 1590 ntBASIC5.25□□□□□ -1.57
SIX2Q9NPC8 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SIX2Q9NPC8 CASC19-206ENST00000641028 1430 ntBASIC5.25□□□□□ -1.57
SIX2Q9NPC8 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SIX2Q9NPC8 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SIX2Q9NPC8 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.25□□□□□ -1.57
SIX2Q9NPC8 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SIX2Q9NPC8 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SIX2Q9NPC8 AL607077.1-201ENST00000401718 499 ntBASIC5.25□□□□□ -1.57
SIX2Q9NPC8 U3.35-201ENST00000408405 208 ntBASIC5.25□□□□□ -1.57
SIX2Q9NPC8 RN7SKP229-201ENST00000410465 302 ntBASIC5.25□□□□□ -1.57
SIX2Q9NPC8 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.25□□□□□ -1.57
SIX2Q9NPC8 AC013470.3-201ENST00000420252 1194 ntBASIC5.25□□□□□ -1.57
SIX2Q9NPC8 RPL36AP10-201ENST00000421785 322 ntBASIC5.25□□□□□ -1.57
SIX2Q9NPC8 BX510359.3-201ENST00000422168 306 ntBASIC5.25□□□□□ -1.57
SIX2Q9NPC8 AL356806.1-201ENST00000422524 916 ntBASIC5.25□□□□□ -1.57
SIX2Q9NPC8 RPS6P14-201ENST00000425165 719 ntBASIC5.25□□□□□ -1.57
SIX2Q9NPC8 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.25□□□□□ -1.57
SIX2Q9NPC8 MAPRE1P3-201ENST00000435438 796 ntBASIC5.25□□□□□ -1.57
SIX2Q9NPC8 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms