Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VTA1Q9NP79 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VTA1Q9NP79 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VTA1Q9NP79 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
VTA1Q9NP79 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.39□□□□□ -1.39
VTA1Q9NP79 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.38□□□□□ -1.39
VTA1Q9NP79 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
VTA1Q9NP79 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VTA1Q9NP79 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VTA1Q9NP79 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
VTA1Q9NP79 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VTA1Q9NP79 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.38□□□□□ -1.39
VTA1Q9NP79 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
VTA1Q9NP79 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
VTA1Q9NP79 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
VTA1Q9NP79 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
VTA1Q9NP79 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
VTA1Q9NP79 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
VTA1Q9NP79 AL049545.1-201ENST00000401856 572 ntBASIC6.38□□□□□ -1.39
VTA1Q9NP79 AL121835.1-201ENST00000404250 354 ntBASIC6.38□□□□□ -1.39
VTA1Q9NP79 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.38□□□□□ -1.39
VTA1Q9NP79 RPS6P23-201ENST00000413224 722 ntBASIC6.38□□□□□ -1.39
VTA1Q9NP79 HMGB3P31-201ENST00000413333 595 ntBASIC6.38□□□□□ -1.39
VTA1Q9NP79 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.38□□□□□ -1.39
VTA1Q9NP79 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC6.38□□□□□ -1.39
VTA1Q9NP79 MTND4P3-201ENST00000417829 541 ntBASIC6.38□□□□□ -1.39
VTA1Q9NP79 LINC01347-201ENST00000417964 355 ntBASIC6.38□□□□□ -1.39
VTA1Q9NP79 OR6K4P-201ENST00000423179 955 ntBASIC6.38□□□□□ -1.39
VTA1Q9NP79 RPL23AP4-201ENST00000427757 463 ntBASIC6.38□□□□□ -1.39
VTA1Q9NP79 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.38□□□□□ -1.39
VTA1Q9NP79 NANOGP9-201ENST00000439890 892 ntBASIC6.38□□□□□ -1.39
VTA1Q9NP79 CNOT7P2-201ENST00000441051 832 ntBASIC6.38□□□□□ -1.39
VTA1Q9NP79 AL592437.1-201ENST00000443781 492 ntBASIC6.38□□□□□ -1.39
VTA1Q9NP79 ZNF886P-201ENST00000450781 723 ntBASIC6.38□□□□□ -1.39
VTA1Q9NP79 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC6.38□□□□□ -1.39
VTA1Q9NP79 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.38□□□□□ -1.39
VTA1Q9NP79 AC021205.1-201ENST00000468797 348 ntBASIC6.38□□□□□ -1.39
VTA1Q9NP79 RPL32P9-201ENST00000487963 407 ntBASIC6.38□□□□□ -1.39
VTA1Q9NP79 AC134050.1-201ENST00000495088 933 ntBASIC6.38□□□□□ -1.39
VTA1Q9NP79 AC093534.1-201ENST00000504977 132 ntBASIC6.38□□□□□ -1.39
VTA1Q9NP79 OR5M14P-201ENST00000506803 618 ntBASIC6.38□□□□□ -1.39
VTA1Q9NP79 RNU6-1308P-201ENST00000516817 103 ntBASIC6.38□□□□□ -1.39
VTA1Q9NP79 CDC42P3-201ENST00000518493 633 ntBASIC6.38□□□□□ -1.39
VTA1Q9NP79 AP001636.2-201ENST00000525517 696 ntBASIC6.38□□□□□ -1.39
VTA1Q9NP79 MTATP6P15-201ENST00000527233 835 ntBASIC6.38□□□□□ -1.39
VTA1Q9NP79 UBTFL10-201ENST00000528532 562 ntBASIC6.38□□□□□ -1.39
VTA1Q9NP79 OR8I1P-201ENST00000529291 931 ntBASIC6.38□□□□□ -1.39
VTA1Q9NP79 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.38□□□□□ -1.39
VTA1Q9NP79 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VTA1Q9NP79 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.38□□□□□ -1.39
VTA1Q9NP79 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.38□□□□□ -1.39
VTA1Q9NP79 AC012254.4-201ENST00000588843 273 ntBASIC6.38□□□□□ -1.39
VTA1Q9NP79 MIR6730-201ENST00000622213 67 ntBASIC6.38□□□□□ -1.39
VTA1Q9NP79 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC6.38□□□□□ -1.39
VTA1Q9NP79 AC017007.4-201ENST00000503353 1352 ntBASIC6.38□□□□□ -1.39
VTA1Q9NP79 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
VTA1Q9NP79 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
VTA1Q9NP79 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
VTA1Q9NP79 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
VTA1Q9NP79 AC005224.3-201ENST00000584683 2140 ntBASIC6.38□□□□□ -1.39
VTA1Q9NP79 AC005225.5-201ENST00000623547 2225 ntBASIC6.38□□□□□ -1.39
VTA1Q9NP79 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VTA1Q9NP79 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
VTA1Q9NP79 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
VTA1Q9NP79 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
VTA1Q9NP79 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VTA1Q9NP79 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
VTA1Q9NP79 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VTA1Q9NP79 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VTA1Q9NP79 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
VTA1Q9NP79 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VTA1Q9NP79 MFSD8-239ENST00000641590 2479 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.37□□□□□ -1.39
VTA1Q9NP79 AL161756.3-201ENST00000641216 2071 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.37□□□□□ -1.39
VTA1Q9NP79 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VTA1Q9NP79 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VTA1Q9NP79 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VTA1Q9NP79 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VTA1Q9NP79 UBE2Q2P1-202ENST00000354771 883 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VTA1Q9NP79 SNORA70-201ENST00000384436 135 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 RNU6-1263P-201ENST00000384601 106 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 MIR223-201ENST00000385204 110 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 AL021331.1-201ENST00000402817 582 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.37□□□□□ -1.39
VTA1Q9NP79 SLC35E1P1-201ENST00000419313 864 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC6.37□□□□□ -1.39
VTA1Q9NP79 VN1R21P-201ENST00000426703 765 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VTA1Q9NP79 GTF2IP3-201ENST00000433887 494 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC6.37□□□□□ -1.39
VTA1Q9NP79 PTGES3P1-201ENST00000439531 483 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.37□□□□□ -1.39
VTA1Q9NP79 SBDSP1-204ENST00000453858 737 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 RN7SL172P-201ENST00000460535 303 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 RN7SL610P-201ENST00000463845 291 ntBASIC6.37□□□□□ -1.39
VTA1Q9NP79 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VTA1Q9NP79 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.37□□□□□ -1.39
VTA1Q9NP79 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms