Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CHD8Q9HCK8 RPL23AP59-201ENST00000399415 461 ntBASIC4.61□□□□□ -1.67
CHD8Q9HCK8 AL022722.2-201ENST00000402519 180 ntBASIC4.61□□□□□ -1.67
CHD8Q9HCK8 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHD8Q9HCK8 H3F3BP2-201ENST00000583907 357 ntBASIC4.61□□□□□ -1.67
CHD8Q9HCK8 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHD8Q9HCK8 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.61□□□□□ -1.67
CHD8Q9HCK8 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CHD8Q9HCK8 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.61□□□□□ -1.67
CHD8Q9HCK8 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.61□□□□□ -1.67
CHD8Q9HCK8 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CHD8Q9HCK8 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CHD8Q9HCK8 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.61□□□□□ -1.67
CHD8Q9HCK8 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CHD8Q9HCK8 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.61□□□□□ -1.67
CHD8Q9HCK8 AC124944.2-201ENST00000429866 1242 ntBASIC4.61□□□□□ -1.67
CHD8Q9HCK8 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.61□□□□□ -1.67
CHD8Q9HCK8 RPS7P7-201ENST00000463499 571 ntBASIC4.61□□□□□ -1.67
CHD8Q9HCK8 PPIAP15-201ENST00000479662 484 ntBASIC4.61□□□□□ -1.67
CHD8Q9HCK8 AC041039.1-201ENST00000485656 536 ntBASIC4.61□□□□□ -1.67
CHD8Q9HCK8 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.61□□□□□ -1.67
CHD8Q9HCK8 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CHD8Q9HCK8 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.61□□□□□ -1.67
CHD8Q9HCK8 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CHD8Q9HCK8 CCNG2P1-201ENST00000549521 1000 ntBASIC4.61□□□□□ -1.67
CHD8Q9HCK8 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.61□□□□□ -1.67
CHD8Q9HCK8 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.61□□□□□ -1.67
CHD8Q9HCK8 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CHD8Q9HCK8 AC073346.2-201ENST00000624724 2058 ntBASIC4.61□□□□□ -1.67
CHD8Q9HCK8 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CHD8Q9HCK8 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
CHD8Q9HCK8 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.61□□□□□ -1.67
CHD8Q9HCK8 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CHD8Q9HCK8 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHD8Q9HCK8 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CHD8Q9HCK8 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHD8Q9HCK8 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CHD8Q9HCK8 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.61□□□□□ -1.67
CHD8Q9HCK8 ADAM24P-201ENST00000398655 2101 ntBASIC4.6□□□□□ -1.67
CHD8Q9HCK8 HMGB3P5-201ENST00000428894 612 ntBASIC4.6□□□□□ -1.67
CHD8Q9HCK8 RPL12P46-201ENST00000436610 195 ntBASIC4.6□□□□□ -1.67
CHD8Q9HCK8 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 AC008958.1-201ENST00000511047 682 ntBASIC4.6□□□□□ -1.67
CHD8Q9HCK8 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 OR4F13P-202ENST00000560066 2054 ntBASIC4.6□□□□□ -1.67
CHD8Q9HCK8 AC015799.1-201ENST00000622996 3122 ntBASIC4.6□□□□□ -1.67
CHD8Q9HCK8 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 AL121950.1-201ENST00000624993 2077 ntBASIC4.6□□□□□ -1.67
CHD8Q9HCK8 MIR34B-201ENST00000385076 84 ntBASIC4.6□□□□□ -1.67
CHD8Q9HCK8 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 AL354714.3-201ENST00000447284 493 ntBASIC4.6□□□□□ -1.67
CHD8Q9HCK8 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 RPS29P2-201ENST00000479278 136 ntBASIC4.6□□□□□ -1.67
CHD8Q9HCK8 AC098976.1-201ENST00000513014 541 ntBASIC4.6□□□□□ -1.67
CHD8Q9HCK8 IGLVIV-65-201ENST00000517313 360 ntBASIC4.6□□□□□ -1.67
CHD8Q9HCK8 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 MIR6715A-201ENST00000615929 79 ntBASIC4.6□□□□□ -1.67
CHD8Q9HCK8 AL049536.1-201ENST00000625043 744 ntBASIC4.6□□□□□ -1.67
CHD8Q9HCK8 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 AC140479.2-201ENST00000421567 3130 ntBASIC4.6□□□□□ -1.67
CHD8Q9HCK8 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 AL731556.1-201ENST00000394628 3711 ntBASIC4.6□□□□□ -1.67
CHD8Q9HCK8 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 AC119674.1-213ENST00000641177 1386 ntBASIC4.6□□□□□ -1.67
CHD8Q9HCK8 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CHD8Q9HCK8 AL357515.1-201ENST00000402967 542 ntBASIC4.59□□□□□ -1.67
CHD8Q9HCK8 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.59□□□□□ -1.67
CHD8Q9HCK8 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CHD8Q9HCK8 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CHD8Q9HCK8 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.59□□□□□ -1.67
CHD8Q9HCK8 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.59□□□□□ -1.67
CHD8Q9HCK8 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
CHD8Q9HCK8 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
CHD8Q9HCK8 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.59□□□□□ -1.67
CHD8Q9HCK8 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.59□□□□□ -1.67
CHD8Q9HCK8 AC009027.1-201ENST00000604510 479 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms