Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
LRRC40Q9H9A6 AC109635.6-201ENST00000525487 1113 ntBASIC5.13□□□□□ -1.59
LRRC40Q9H9A6 AP002373.2-201ENST00000541631 1060 ntBASIC5.13□□□□□ -1.59
LRRC40Q9H9A6 AP005262.1-201ENST00000582646 997 ntBASIC5.13□□□□□ -1.59
LRRC40Q9H9A6 MIR3936-201ENST00000584304 110 ntBASIC5.13□□□□□ -1.59
LRRC40Q9H9A6 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.13□□□□□ -1.59
LRRC40Q9H9A6 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRRC40Q9H9A6 AL137072.1-201ENST00000603444 466 ntBASIC5.13□□□□□ -1.59
LRRC40Q9H9A6 AP000864.1-201ENST00000609424 650 ntBASIC5.13□□□□□ -1.59
LRRC40Q9H9A6 BNIP3P41-202ENST00000616656 861 ntBASIC5.13□□□□□ -1.59
LRRC40Q9H9A6 AC099494.2-201ENST00000623371 978 ntBASIC5.13□□□□□ -1.59
LRRC40Q9H9A6 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
LRRC40Q9H9A6 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRRC40Q9H9A6 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
LRRC40Q9H9A6 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LRRC40Q9H9A6 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
LRRC40Q9H9A6 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
LRRC40Q9H9A6 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LRRC40Q9H9A6 AL356317.1-201ENST00000396110 1436 ntBASIC5.13□□□□□ -1.59
LRRC40Q9H9A6 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.13□□□□□ -1.59
LRRC40Q9H9A6 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 RN7SKP74-201ENST00000362849 309 ntBASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 RPL10P10-201ENST00000403509 664 ntBASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 AL391361.1-201ENST00000405580 489 ntBASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 SNORA77-201ENST00000408716 125 ntBASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 OR6C64P-201ENST00000419708 825 ntBASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 DDX39BP1-205ENST00000422507 192 ntBASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 AL121578.1-201ENST00000428051 892 ntBASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 BX323845.1-201ENST00000432417 179 ntBASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 RPS29P9-201ENST00000440360 171 ntBASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 KNOP1P3-201ENST00000446933 426 ntBASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 AL354714.3-201ENST00000447284 493 ntBASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 BTF3P6-201ENST00000448054 499 ntBASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 FAR2P1-206ENST00000449736 709 ntBASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 AL389915.2-201ENST00000454576 441 ntBASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 UBA52P7-201ENST00000486088 380 ntBASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 CCNHP1-201ENST00000513311 678 ntBASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 RPL23AP53-201ENST00000521854 457 ntBASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 AC025857.1-201ENST00000525252 377 ntBASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 AC007225.2-201ENST00000562529 256 ntBASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 AC116553.2-201ENST00000564203 463 ntBASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 MIR6768-201ENST00000610734 72 ntBASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 AC015922.4-201ENST00000612568 690 ntBASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 AL731532.2-201ENST00000623542 1953 ntBASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 AC104260.2-201ENST00000623551 3497 ntBASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 PCAT14-202ENST00000627127 3935 ntBASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
LRRC40Q9H9A6 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LRRC40Q9H9A6 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LRRC40Q9H9A6 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LRRC40Q9H9A6 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
LRRC40Q9H9A6 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LRRC40Q9H9A6 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
LRRC40Q9H9A6 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.11□□□□□ -1.59
LRRC40Q9H9A6 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LRRC40Q9H9A6 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.11□□□□□ -1.59
LRRC40Q9H9A6 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
LRRC40Q9H9A6 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LRRC40Q9H9A6 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LRRC40Q9H9A6 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
LRRC40Q9H9A6 VDAC2P1-201ENST00000399358 958 ntBASIC5.11□□□□□ -1.59
LRRC40Q9H9A6 AL136131.1-201ENST00000406079 803 ntBASIC5.11□□□□□ -1.59
LRRC40Q9H9A6 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms