Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC092647.2-201ENST00000452998 253 ntBASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 RPL5P22-201ENST00000480199 884 ntBASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 MTND3P6-201ENST00000485242 339 ntBASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 AC138409.2-202ENST00000507274 458 ntBASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 AP002373.2-201ENST00000541631 1060 ntBASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 AC007342.5-201ENST00000571340 2142 ntBASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 VN1R81P-201ENST00000602085 372 ntBASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 AL049794.2-201ENST00000616301 365 ntBASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 ECM1P2-201ENST00000503354 1577 ntBASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 AC104260.2-201ENST00000623551 3497 ntBASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 SNORA17.1-201ENST00000362945 126 ntBASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 RNA5SP132-201ENST00000364725 118 ntBASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 SNORA66-201ENST00000384792 133 ntBASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 AL357515.1-201ENST00000402967 542 ntBASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 SETP15-201ENST00000412724 337 ntBASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 RPL12P43-201ENST00000420608 499 ntBASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 E2F6P2-201ENST00000420708 748 ntBASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 CFL1P1-202ENST00000432948 411 ntBASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 OR6C72P-201ENST00000451403 892 ntBASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 AC108751.2-201ENST00000469993 231 ntBASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 AC108693.1-201ENST00000496068 432 ntBASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 AC073358.1-201ENST00000505671 684 ntBASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 RNU6-551P-201ENST00000516661 103 ntBASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 AL049779.2-201ENST00000553847 315 ntBASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 OR11J2P-201ENST00000555298 907 ntBASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 EIF1AXP2-201ENST00000555940 413 ntBASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 OR8G7P-201ENST00000616658 848 ntBASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 AC015804.1-201ENST00000622935 435 ntBASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HDHD3Q9BSH5 AL133268.1-201ENST00000405676 1401 ntBASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 NAMPTP1-201ENST00000440465 2514 ntBASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 MIR621-201ENST00000384919 96 ntBASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 SNORA17A-201ENST00000391185 133 ntBASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 MIR1282-201ENST00000408865 101 ntBASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 AC104843.2-201ENST00000427666 297 ntBASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 FABP7P2-201ENST00000429946 379 ntBASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 AC245047.2-201ENST00000441060 530 ntBASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 RNU6-775P-201ENST00000459318 96 ntBASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 RN7SL517P-201ENST00000462240 305 ntBASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HDHD3Q9BSH5 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms