Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC4.13□□□□□ -1.75
VGLL1Q99990 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
VGLL1Q99990 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
VGLL1Q99990 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
VGLL1Q99990 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VGLL1Q99990 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.13□□□□□ -1.75
VGLL1Q99990 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VGLL1Q99990 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VGLL1Q99990 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VGLL1Q99990 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VGLL1Q99990 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
VGLL1Q99990 AC133552.1-201ENST00000569988 4007 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
VGLL1Q99990 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VGLL1Q99990 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.13□□□□□ -1.75
VGLL1Q99990 RNU6-354P-201ENST00000383862 107 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 RNU6-610P-201ENST00000384264 107 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VGLL1Q99990 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VGLL1Q99990 AL445213.1-201ENST00000412589 747 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.13□□□□□ -1.75
VGLL1Q99990 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.13□□□□□ -1.75
VGLL1Q99990 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.13□□□□□ -1.75
VGLL1Q99990 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
VGLL1Q99990 AL022331.1-201ENST00000429025 477 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.13□□□□□ -1.75
VGLL1Q99990 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.13□□□□□ -1.75
VGLL1Q99990 MTATP6P26-201ENST00000445926 662 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 AC073909.1-201ENST00000447112 999 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.13□□□□□ -1.75
VGLL1Q99990 AL358876.1-201ENST00000453364 1075 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.13□□□□□ -1.75
VGLL1Q99990 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.13□□□□□ -1.75
VGLL1Q99990 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VGLL1Q99990 YRDCP3-201ENST00000456507 480 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 MTCO2P6-201ENST00000463134 685 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 AP000942.1-201ENST00000463969 747 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.13□□□□□ -1.75
VGLL1Q99990 RPL21P18-201ENST00000469899 480 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 CYCSP20-201ENST00000473154 315 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.13□□□□□ -1.75
VGLL1Q99990 AP002884.1-201ENST00000479691 655 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 AC022215.1-201ENST00000481770 362 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 EIF1P7-201ENST00000487533 337 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.13□□□□□ -1.75
VGLL1Q99990 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.13□□□□□ -1.75
VGLL1Q99990 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.13□□□□□ -1.75
VGLL1Q99990 AC093720.1-201ENST00000505681 714 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 AC025458.1-201ENST00000506046 166 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.13□□□□□ -1.75
VGLL1Q99990 AC114781.3-201ENST00000512083 142 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 HMGN1P9-201ENST00000515212 298 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 AC010476.1-201ENST00000519111 851 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.13□□□□□ -1.75
VGLL1Q99990 MTND2P38-201ENST00000522536 667 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.13□□□□□ -1.75
VGLL1Q99990 OR8G5-201ENST00000524943 1041 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.13□□□□□ -1.75
VGLL1Q99990 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.13□□□□□ -1.75
VGLL1Q99990 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.13□□□□□ -1.75
VGLL1Q99990 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.13□□□□□ -1.75
VGLL1Q99990 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
VGLL1Q99990 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.13□□□□□ -1.75
VGLL1Q99990 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.13□□□□□ -1.75
VGLL1Q99990 LINC00556-201ENST00000569603 412 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 AP005403.1-201ENST00000579720 229 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 AC127024.5-201ENST00000580085 462 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 MIR4271-201ENST00000582451 67 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.13□□□□□ -1.75
VGLL1Q99990 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.13□□□□□ -1.75
VGLL1Q99990 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.13□□□□□ -1.75
VGLL1Q99990 AC079880.2-201ENST00000603790 1213 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 Z99289.3-201ENST00000605586 594 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 AC021851.1-201ENST00000608537 1082 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 AC124016.2-201ENST00000610058 665 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 AC025574.2-201ENST00000615621 514 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VGLL1Q99990 AP001962.1-201ENST00000624114 559 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 AL390318.1-201ENST00000624564 687 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.13□□□□□ -1.75
VGLL1Q99990 AC019080.5-201ENST00000624891 757 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 AC099654.6-201ENST00000636487 512 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 AC073869.8-201ENST00000641806 335 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VGLL1Q99990 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
VGLL1Q99990 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VGLL1Q99990 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
VGLL1Q99990 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VGLL1Q99990 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
VGLL1Q99990 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
VGLL1Q99990 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
VGLL1Q99990 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VGLL1Q99990 ADAM5-202ENST00000399789 1942 ntBASIC4.13□□□□□ -1.75
VGLL1Q99990 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VGLL1Q99990 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
VGLL1Q99990 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
VGLL1Q99990 RBPJP2-201ENST00000618187 1444 ntBASIC4.12□□□□□ -1.75
VGLL1Q99990 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.12□□□□□ -1.75
VGLL1Q99990 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VGLL1Q99990 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms