Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC022784.5-201ENST00000522241 437 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 HAUS1P3-201ENST00000523909 662 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC005332.4-201ENST00000592752 579 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AL109918.3-201ENST00000603072 338 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 RN7SL544P-201ENST00000617232 284 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC022306.3-201ENST00000619930 550 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 RN7SL763P-201ENST00000620922 284 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC091931.1-201ENST00000623488 728 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC098679.4-201ENST00000624241 654 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 SEL1L-201ENST00000336735 7925 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 SEMA4D-202ENST00000356444 4503 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC018809.2-201ENST00000602436 3823 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 UTY-203ENST00000362096 4990 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 TNFRSF9-204ENST00000615230 5970 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 CMKLR1-201ENST00000312143 5283 ntAPPRIS ALT2 TSL 2 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 NLK-201ENST00000407008 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 RNU6-595P-201ENST00000363944 107 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 Y_RNA.221-201ENST00000364248 96 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 Y_RNA.307-201ENST00000365022 117 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 VN1R36P-201ENST00000414936 291 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 COX6B1P1-201ENST00000415962 213 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC244033.1-201ENST00000426826 870 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC016712.1-201ENST00000431088 378 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC092106.1-201ENST00000444291 373 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC022206.1-201ENST00000495947 347 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 OR8G5-201ENST00000524943 1041 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC005730.3-201ENST00000583067 366 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 SNX6P1-201ENST00000601728 1224 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 NIN-201ENST00000245441 10293 ntAPPRIS P5 TSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 ANGEL2-202ENST00000366962 4649 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 KANSL1-205ENST00000572904 4973 ntAPPRIS P3 TSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 PHF8-204ENST00000357988 6024 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 KALRN-201ENST00000240874 6537 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 KALRN-211ENST00000460856 6509 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 SORBS2-204ENST00000355634 4622 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 SLC26A2-201ENST00000286298 8080 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 USP54-201ENST00000339859 6247 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 AL133216.2-201ENST00000622550 7213 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 UNC119-205ENST00000484980 4189 ntTSL 2 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 DDHD1-203ENST00000395606 12769 ntAPPRIS ALT2 TSL 2 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 ZNF217-201ENST00000302342 5633 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 CC2D2A-202ENST00000424120 5249 ntAPPRIS P3 TSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 RNU6-694P-201ENST00000364071 147 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMCN1Q96RW7 RNU6-398P-201ENST00000384143 109 ntBASIC1.87□□□□□ -2.11
HMCN1Q96RW7 RNU6-411P-201ENST00000384451 107 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms