Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC108161.1-201ENST00000461060 402 ntBASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 COX6B1P2-201ENST00000489624 230 ntBASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 AC108693.1-201ENST00000496068 432 ntBASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 RNA5SP228-201ENST00000516232 133 ntBASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 AC125612.1-201ENST00000547580 377 ntBASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 AC069307.1-201ENST00000602820 447 ntBASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 AC074276.2-201ENST00000619891 348 ntBASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 MIR6837-201ENST00000620884 64 ntBASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 AL139254.3-201ENST00000641097 674 ntBASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
PDLIM5Q96HC4 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 SNORA67-201ENST00000384423 137 ntBASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 VDAC2P1-201ENST00000399358 958 ntBASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 RNA5SP296-201ENST00000410523 111 ntBASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 RN7SKP222-201ENST00000410651 315 ntBASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 RNA5SP498-201ENST00000411342 120 ntBASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 AC009313.2-201ENST00000417893 1941 ntBASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 TRGV6-201ENST00000417928 299 ntBASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 AC002069.1-201ENST00000429649 1159 ntBASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 AC023512.1-201ENST00000444513 499 ntBASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 PSMC1P13-201ENST00000458195 985 ntBASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 AC090543.1-201ENST00000492168 485 ntBASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 AC097173.1-201ENST00000505862 819 ntBASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 AL133247.2-201ENST00000603236 482 ntBASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 AC006363.1-201ENST00000603806 463 ntBASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 AL133406.3-201ENST00000606817 541 ntBASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 AC004477.3-201ENST00000614061 590 ntBASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 AC009032.1-201ENST00000617574 431 ntBASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 AP003497.2-201ENST00000624220 967 ntBASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 CASC19-221ENST00000641309 1382 ntBASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 AC104623.2-202ENST00000623477 4002 ntBASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 AP000756.2-201ENST00000624168 2567 ntBASIC5.1□□□□□ -1.59
PDLIM5Q96HC4 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 RNA5SP242-201ENST00000364171 118 ntBASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 SNORA27.3-201ENST00000364937 134 ntBASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 OR3A2-201ENST00000408891 1076 ntBASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 CTSL3P-202ENST00000412179 788 ntBASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 AC211486.3-201ENST00000412694 621 ntBASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 RPL6P29-201ENST00000414863 865 ntBASIC5.09□□□□□ -1.59
PDLIM5Q96HC4 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms