Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 AC099786.3-201ENST00000565735 1410 ntBASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 RN7SKP275-201ENST00000364626 301 ntBASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 RNU4-28P-201ENST00000364739 141 ntBASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 RNA5SP241-201ENST00000391326 114 ntBASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 RPL22P18-201ENST00000417197 377 ntBASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 USP9YP21-201ENST00000420603 432 ntBASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 MTND5P25-201ENST00000430499 799 ntBASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 OR6D1P-201ENST00000436165 939 ntBASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 SNRPFP2-201ENST00000440710 251 ntBASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 CR769776.1-201ENST00000441254 787 ntBASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 AL157827.1-201ENST00000447622 132 ntBASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 Z95152.1-201ENST00000453556 656 ntBASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 RFPL4AP3-201ENST00000515267 345 ntBASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 AP003717.3-201ENST00000544832 1180 ntBASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 ZNF971P-201ENST00000562068 1249 ntBASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 AC023824.3-201ENST00000569003 562 ntBASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 SUMO2P14-201ENST00000604488 293 ntBASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 AC104985.3-201ENST00000623479 597 ntBASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 AC025262.3-201ENST00000623666 360 ntBASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 AC092159.4-201ENST00000624944 550 ntBASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 AL596275.2-207ENST00000641188 675 ntBASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
ATG4AQ8WYN0 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 ICE2P1-201ENST00000512800 1849 ntBASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 MIR375-201ENST00000362103 64 ntBASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 RNA5SP433-201ENST00000364491 114 ntBASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 OR7E156P-201ENST00000400303 464 ntBASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 AL603865.2-201ENST00000401679 213 ntBASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 RN7SKP97-201ENST00000410966 333 ntBASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 UBE2V1P11-201ENST00000411559 285 ntBASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 RPL24P2-201ENST00000421023 475 ntBASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 AC000041.1-201ENST00000439655 175 ntBASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 AC090804.1-201ENST00000448870 490 ntBASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 RPL5P13-201ENST00000462840 709 ntBASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 RN7SL170P-201ENST00000487098 295 ntBASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 AC134050.1-201ENST00000495088 933 ntBASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 RPL5P23-201ENST00000496040 868 ntBASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.65□□□□□ -1.5
ATG4AQ8WYN0 AC105313.1-201ENST00000509121 353 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms