Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AL138787.1-202ENST00000437804 898 ntBASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 AC007000.2-201ENST00000442564 487 ntBASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 BUD31P2-201ENST00000449374 300 ntBASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 RPL5P22-201ENST00000480199 884 ntBASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 AC093663.2-201ENST00000484625 313 ntBASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 AC015864.1-201ENST00000496512 544 ntBASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 AC105031.1-201ENST00000518550 476 ntBASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 BLZF2P-201ENST00000553776 1130 ntBASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 AL450270.1-201ENST00000606160 391 ntBASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 AC000068.2-201ENST00000608816 460 ntBASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 CR589904.2-201ENST00000612533 440 ntBASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 BNIP3P41-202ENST00000616656 861 ntBASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 AC118658.2-201ENST00000618697 459 ntBASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 AP006248.3-201ENST00000623580 594 ntBASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 AL022393.1-201ENST00000625142 1677 ntBASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.24□□□□□ -1.57
SLC44A1Q8WWI5 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 AL592494.2-201ENST00000425455 1548 ntBASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 RN7SKP74-201ENST00000362849 309 ntBASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 RNU6-609P-201ENST00000365459 107 ntBASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 AL390316.1-201ENST00000406279 553 ntBASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 NPM1P40-201ENST00000412758 733 ntBASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 NPM1P22-201ENST00000427761 952 ntBASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 SNRPFP2-201ENST00000440710 251 ntBASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 AP000281.1-201ENST00000444036 316 ntBASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 AC023141.9-201ENST00000458734 412 ntBASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 AC104629.2-201ENST00000468627 598 ntBASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 RN7SL717P-201ENST00000478343 297 ntBASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 AC005412.2-201ENST00000492004 341 ntBASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 AC016550.3-201ENST00000515706 767 ntBASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 AL671862.1-201ENST00000515851 349 ntBASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 RNA5SP373-201ENST00000517271 95 ntBASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 MIR4472-2-201ENST00000582069 67 ntBASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 AC105148.1-201ENST00000604961 409 ntBASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 AC135178.6-201ENST00000605314 398 ntBASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 AC025016.1-201ENST00000616746 682 ntBASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 AL445493.3-201ENST00000619568 477 ntBASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 PCAT14-202ENST00000627127 3935 ntBASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 TTC39DP-201ENST00000416781 1688 ntBASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 AC017002.4-201ENST00000604721 1525 ntBASIC5.23□□□□□ -1.57
SLC44A1Q8WWI5 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
SLC44A1Q8WWI5 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A1Q8WWI5 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A1Q8WWI5 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SLC44A1Q8WWI5 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms