Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SHROOM3Q8TF72 AL672167.1-204ENST00000641875 3017 ntBASIC5.08□□□□□ -1.6
SHROOM3Q8TF72 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHROOM3Q8TF72 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SHROOM3Q8TF72 ZNF652P1-201ENST00000442420 1309 ntBASIC5.08□□□□□ -1.6
SHROOM3Q8TF72 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 RPL7P57-201ENST00000423238 740 ntBASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 MGAT2P2-201ENST00000427194 797 ntBASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 AL137845.2-201ENST00000444292 988 ntBASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 AC093166.2-201ENST00000455969 1017 ntBASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 RN7SL354P-201ENST00000469282 294 ntBASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 AC090602.1-201ENST00000469695 252 ntBASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 AC090286.3-201ENST00000573133 187 ntBASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 AL022401.1-201ENST00000619498 108 ntBASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 AC013429.2-201ENST00000418798 781 ntBASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 AC012519.1-201ENST00000424588 610 ntBASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 NDUFA5P8-201ENST00000449019 346 ntBASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 RBMY2TP-201ENST00000451162 947 ntBASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 GLRXP2-201ENST00000555594 321 ntBASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 SS18L2P2-201ENST00000583960 235 ntBASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 MEMO1P5-201ENST00000604810 406 ntBASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHROOM3Q8TF72 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 SNORA70.10-201ENST00000384515 134 ntBASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 AP002530.1-201ENST00000405705 684 ntBASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 AC004690.1-201ENST00000418216 328 ntBASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 RSL24D1P6-201ENST00000426934 401 ntBASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 AC004975.1-201ENST00000428733 208 ntBASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 OR2A3P-201ENST00000493774 953 ntBASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 RNA5SP230-201ENST00000517039 122 ntBASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 RNU6-709P-201ENST00000517257 104 ntBASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 AC136624.4-201ENST00000573044 370 ntBASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 EIF1P5-201ENST00000585002 234 ntBASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 MIR6780A-201ENST00000615089 68 ntBASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 AC015914.2-201ENST00000618167 288 ntBASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 MAPK10-263ENST00000641052 4307 ntBASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 OR9K1P-202ENST00000641111 3217 ntBASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.06□□□□□ -1.6
SHROOM3Q8TF72 RNA5SP479-201ENST00000364858 117 ntBASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 AL358178.1-201ENST00000407698 397 ntBASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 IGHV5-78-201ENST00000450948 295 ntBASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 AL391358.1-201ENST00000605342 190 ntBASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 AP005435.3-201ENST00000531260 3198 ntBASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SHROOM3Q8TF72 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms