Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 MTCO1P6-201ENST00000481192 1384 ntBASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 LINC01616-201ENST00000561816 2280 ntBASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 QRSL1P1-201ENST00000400977 1540 ntBASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 Y_RNA.38-201ENST00000362617 102 ntBASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 RNU6-348P-201ENST00000384386 107 ntBASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 RPS20P15-201ENST00000412792 311 ntBASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 RPL21P108-201ENST00000413857 481 ntBASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 FABP7P1-201ENST00000424004 391 ntBASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 AL389925.1-201ENST00000432257 728 ntBASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 AC112492.2-201ENST00000432774 1030 ntBASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 AC110602.1-201ENST00000437414 318 ntBASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 RPL5P7-201ENST00000444235 813 ntBASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 HMGB1P7-201ENST00000450921 612 ntBASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 OR9M1P-201ENST00000459641 921 ntBASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 ANK3-207ENST00000460468 677 ntTSL 3 BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 RPL35AP19-201ENST00000469425 329 ntBASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 AC069439.1-201ENST00000494739 167 ntBASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 ARL2BPP6-201ENST00000512757 439 ntBASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 MIR5095-201ENST00000578844 88 ntBASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 AC027243.2-201ENST00000602530 724 ntBASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 AC015871.2-201ENST00000603605 948 ntBASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 AL390816.3-201ENST00000604527 1066 ntBASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 AC073046.2-201ENST00000604756 527 ntBASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 TNPO1P2-201ENST00000426249 2665 ntBASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 AC104966.1-201ENST00000467010 1464 ntBASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 AC074141.1-201ENST00000588129 2995 ntBASIC6.78□□□□□ -1.32
SHKBP1Q8TBC3 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
SHKBP1Q8TBC3 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
SHKBP1Q8TBC3 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.77□□□□□ -1.33
SHKBP1Q8TBC3 EED-206ENST00000527888 1422 ntTSL 2 BASIC6.77□□□□□ -1.33
SHKBP1Q8TBC3 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.77□□□□□ -1.33
SHKBP1Q8TBC3 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SHKBP1Q8TBC3 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SHKBP1Q8TBC3 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.77□□□□□ -1.33
SHKBP1Q8TBC3 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.77□□□□□ -1.33
SHKBP1Q8TBC3 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.77□□□□□ -1.33
SHKBP1Q8TBC3 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SHKBP1Q8TBC3 RN7SKP269-201ENST00000365545 319 ntBASIC6.77□□□□□ -1.33
SHKBP1Q8TBC3 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.77□□□□□ -1.33
SHKBP1Q8TBC3 MT-TD-201ENST00000387419 68 ntBASIC6.77□□□□□ -1.33
SHKBP1Q8TBC3 HMGB1P10-201ENST00000395823 563 ntBASIC6.77□□□□□ -1.33
SHKBP1Q8TBC3 AL157702.1-201ENST00000398764 426 ntBASIC6.77□□□□□ -1.33
SHKBP1Q8TBC3 SNORA77.2-201ENST00000408571 112 ntBASIC6.77□□□□□ -1.33
SHKBP1Q8TBC3 AC002524.1-201ENST00000411687 547 ntBASIC6.77□□□□□ -1.33
SHKBP1Q8TBC3 SEPT7P8-201ENST00000413308 775 ntBASIC6.77□□□□□ -1.33
SHKBP1Q8TBC3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC6.77□□□□□ -1.33
SHKBP1Q8TBC3 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.77□□□□□ -1.33
SHKBP1Q8TBC3 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
SHKBP1Q8TBC3 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.77□□□□□ -1.33
SHKBP1Q8TBC3 BTF3P10-201ENST00000433415 495 ntBASIC6.77□□□□□ -1.33
SHKBP1Q8TBC3 CXCR2P1-202ENST00000443392 1074 ntBASIC6.77□□□□□ -1.33
SHKBP1Q8TBC3 AC011742.2-201ENST00000443818 352 ntBASIC6.77□□□□□ -1.33
SHKBP1Q8TBC3 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC6.77□□□□□ -1.33
SHKBP1Q8TBC3 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.77□□□□□ -1.33
SHKBP1Q8TBC3 DNAJC19P1-201ENST00000455312 319 ntBASIC6.77□□□□□ -1.33
SHKBP1Q8TBC3 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC6.77□□□□□ -1.33
SHKBP1Q8TBC3 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms