Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.61□□□□□ -1.51
BEST2Q8NFU1 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
BEST2Q8NFU1 AL356968.2-201ENST00000412769 1257 ntBASIC5.61□□□□□ -1.51
BEST2Q8NFU1 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.61□□□□□ -1.51
BEST2Q8NFU1 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
BEST2Q8NFU1 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.61□□□□□ -1.51
BEST2Q8NFU1 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.61□□□□□ -1.51
BEST2Q8NFU1 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.61□□□□□ -1.51
BEST2Q8NFU1 NOP56P2-201ENST00000447491 769 ntBASIC5.61□□□□□ -1.51
BEST2Q8NFU1 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
BEST2Q8NFU1 AP002345.1-201ENST00000456493 928 ntBASIC5.61□□□□□ -1.51
BEST2Q8NFU1 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.61□□□□□ -1.51
BEST2Q8NFU1 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.61□□□□□ -1.51
BEST2Q8NFU1 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.61□□□□□ -1.51
BEST2Q8NFU1 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.61□□□□□ -1.51
BEST2Q8NFU1 RN7SKP66-201ENST00000516681 231 ntBASIC5.61□□□□□ -1.51
BEST2Q8NFU1 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.61□□□□□ -1.51
BEST2Q8NFU1 AC138832.1-201ENST00000522871 556 ntBASIC5.61□□□□□ -1.51
BEST2Q8NFU1 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
BEST2Q8NFU1 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
BEST2Q8NFU1 AP002373.2-201ENST00000541631 1060 ntBASIC5.61□□□□□ -1.51
BEST2Q8NFU1 AC092490.3-201ENST00000545370 572 ntBASIC5.61□□□□□ -1.51
BEST2Q8NFU1 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.61□□□□□ -1.51
BEST2Q8NFU1 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.61□□□□□ -1.51
BEST2Q8NFU1 AC092868.3-201ENST00000560515 784 ntBASIC5.61□□□□□ -1.51
BEST2Q8NFU1 MIR4646-201ENST00000580775 63 ntBASIC5.61□□□□□ -1.51
BEST2Q8NFU1 LSM1P2-201ENST00000604911 322 ntBASIC5.61□□□□□ -1.51
BEST2Q8NFU1 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.61□□□□□ -1.51
BEST2Q8NFU1 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.61□□□□□ -1.51
BEST2Q8NFU1 TCP11X1-202ENST00000622971 1372 ntBASIC5.61□□□□□ -1.51
BEST2Q8NFU1 AP003499.2-201ENST00000624100 483 ntBASIC5.61□□□□□ -1.51
BEST2Q8NFU1 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.61□□□□□ -1.51
BEST2Q8NFU1 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
BEST2Q8NFU1 AP005435.3-201ENST00000531260 3198 ntBASIC5.61□□□□□ -1.51
BEST2Q8NFU1 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.61□□□□□ -1.51
BEST2Q8NFU1 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
BEST2Q8NFU1 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
BEST2Q8NFU1 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BEST2Q8NFU1 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
BEST2Q8NFU1 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BEST2Q8NFU1 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.6□□□□□ -1.51
BEST2Q8NFU1 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BEST2Q8NFU1 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.6□□□□□ -1.51
BEST2Q8NFU1 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
BEST2Q8NFU1 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
BEST2Q8NFU1 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BEST2Q8NFU1 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.6□□□□□ -1.51
BEST2Q8NFU1 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BEST2Q8NFU1 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
BEST2Q8NFU1 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
BEST2Q8NFU1 RNU6-40P-201ENST00000384254 107 ntBASIC5.6□□□□□ -1.51
BEST2Q8NFU1 ST13P16-201ENST00000401760 781 ntBASIC5.6□□□□□ -1.51
BEST2Q8NFU1 AL356057.1-202ENST00000402263 756 ntBASIC5.6□□□□□ -1.51
BEST2Q8NFU1 AL589647.1-201ENST00000402485 466 ntBASIC5.6□□□□□ -1.51
BEST2Q8NFU1 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.6□□□□□ -1.51
BEST2Q8NFU1 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
BEST2Q8NFU1 AC073464.3-201ENST00000422564 712 ntBASIC5.6□□□□□ -1.51
BEST2Q8NFU1 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.6□□□□□ -1.51
BEST2Q8NFU1 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.6□□□□□ -1.51
BEST2Q8NFU1 AC023141.6-201ENST00000429418 337 ntBASIC5.6□□□□□ -1.51
BEST2Q8NFU1 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.6□□□□□ -1.51
BEST2Q8NFU1 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.6□□□□□ -1.51
BEST2Q8NFU1 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.6□□□□□ -1.51
BEST2Q8NFU1 AC090804.1-201ENST00000448870 490 ntBASIC5.6□□□□□ -1.51
BEST2Q8NFU1 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.6□□□□□ -1.51
BEST2Q8NFU1 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.6□□□□□ -1.51
BEST2Q8NFU1 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.6□□□□□ -1.51
BEST2Q8NFU1 HMGB1P47-201ENST00000511281 589 ntBASIC5.6□□□□□ -1.51
BEST2Q8NFU1 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.6□□□□□ -1.51
BEST2Q8NFU1 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.6□□□□□ -1.51
BEST2Q8NFU1 AC013701.1-201ENST00000522657 465 ntBASIC5.6□□□□□ -1.51
BEST2Q8NFU1 AP000676.2-201ENST00000529711 301 ntBASIC5.6□□□□□ -1.51
BEST2Q8NFU1 OR5D15P-201ENST00000531671 942 ntBASIC5.6□□□□□ -1.51
BEST2Q8NFU1 AC008147.3-201ENST00000548666 354 ntBASIC5.6□□□□□ -1.51
BEST2Q8NFU1 CKS1BP1-201ENST00000555221 240 ntBASIC5.6□□□□□ -1.51
BEST2Q8NFU1 AC122134.1-202ENST00000569111 1201 ntBASIC5.6□□□□□ -1.51
BEST2Q8NFU1 MIMT1-201ENST00000597105 1050 ntBASIC5.6□□□□□ -1.51
BEST2Q8NFU1 AL133247.2-201ENST00000603236 482 ntBASIC5.6□□□□□ -1.51
BEST2Q8NFU1 AC090510.2-201ENST00000617465 629 ntBASIC5.6□□□□□ -1.51
BEST2Q8NFU1 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.6□□□□□ -1.51
BEST2Q8NFU1 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
BEST2Q8NFU1 AC106858.1-201ENST00000637497 429 ntBASIC5.6□□□□□ -1.51
BEST2Q8NFU1 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
BEST2Q8NFU1 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
BEST2Q8NFU1 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
BEST2Q8NFU1 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
BEST2Q8NFU1 AL031595.2-201ENST00000624215 19071 ntBASIC5.59□□□□□ -1.51
BEST2Q8NFU1 AC073429.2-201ENST00000569694 1444 ntBASIC5.59□□□□□ -1.51
BEST2Q8NFU1 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
BEST2Q8NFU1 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
BEST2Q8NFU1 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
BEST2Q8NFU1 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
BEST2Q8NFU1 RNA5SP223-201ENST00000365174 120 ntBASIC5.59□□□□□ -1.51
BEST2Q8NFU1 OR1L6-202ENST00000373684 1044 ntBASIC5.59□□□□□ -1.51
BEST2Q8NFU1 MIR550A3-201ENST00000390735 95 ntBASIC5.59□□□□□ -1.51
BEST2Q8NFU1 RNA5SP241-201ENST00000391326 114 ntBASIC5.59□□□□□ -1.51
BEST2Q8NFU1 AL645733.1-201ENST00000402250 217 ntBASIC5.59□□□□□ -1.51
BEST2Q8NFU1 NACAP7-201ENST00000407371 609 ntBASIC5.59□□□□□ -1.51
BEST2Q8NFU1 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.59□□□□□ -1.51
BEST2Q8NFU1 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms