Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 CFL1P1-202ENST00000432948 411 ntBASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 Z80107.2-201ENST00000445127 392 ntBASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 AL691482.1-201ENST00000453255 87 ntBASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 RPS17P2-201ENST00000461663 408 ntBASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 RN7SL517P-201ENST00000462240 305 ntBASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 RN7SL610P-201ENST00000463845 291 ntBASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 RN7SL443P-201ENST00000464331 290 ntBASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 EIF1P7-201ENST00000487533 337 ntBASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 RN7SL30P-201ENST00000488416 306 ntBASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 AC008536.1-201ENST00000602872 669 ntBASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 IMMP1LP3-201ENST00000604197 224 ntBASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 CASC19-264ENST00000641912 1184 ntBASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 RNA5SP335-201ENST00000363817 110 ntBASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 LRRC37BP1-201ENST00000398851 714 ntBASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 RNA5SP146-201ENST00000410743 123 ntBASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 AL450023.3-201ENST00000440592 271 ntBASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 OTX2P1-201ENST00000450956 354 ntBASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 AC005008.1-201ENST00000456151 612 ntBASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 GSTP1P1-201ENST00000548078 319 ntBASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 MIR6730-201ENST00000622213 67 ntBASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 AC079298.2-201ENST00000623885 459 ntBASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC112Q8NEF3 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.46□□□□□ -1.53
CCDC112Q8NEF3 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CCDC112Q8NEF3 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CCDC112Q8NEF3 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 RN7SKP104-201ENST00000362605 328 ntBASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 AC009804.1-201ENST00000400949 179 ntBASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 NUDT19P3-201ENST00000404698 555 ntBASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 AC002524.1-201ENST00000411687 547 ntBASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 AL445213.1-201ENST00000412589 747 ntBASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 AC009237.10-201ENST00000414112 510 ntBASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 RPS4XP16-201ENST00000427198 791 ntBASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 RN7SL547P-201ENST00000490793 290 ntBASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 OR10G5P-201ENST00000532733 358 ntBASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 AL021707.7-201ENST00000607991 416 ntBASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 AL590763.1-201ENST00000398297 1545 ntBASIC5.46□□□□□ -1.54
CCDC112Q8NEF3 SAMMSON-213ENST00000641336 1521 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms