Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.15□□□□□ -1.75
CCDC168Q8NDH2 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC168Q8NDH2 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC168Q8NDH2 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.15□□□□□ -1.75
CCDC168Q8NDH2 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC168Q8NDH2 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC168Q8NDH2 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC168Q8NDH2 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC4.15□□□□□ -1.75
CCDC168Q8NDH2 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC168Q8NDH2 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 SNORA66-201ENST00000384792 133 ntBASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 AC133552.1-201ENST00000569988 4007 ntBASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 AL137058.3-201ENST00000624531 3099 ntBASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 OR8V1P-201ENST00000395193 873 ntBASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 AL358232.1-201ENST00000448030 501 ntBASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 AC027807.1-201ENST00000559921 996 ntBASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 AL161756.2-201ENST00000604597 246 ntBASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CCDC168Q8NDH2 UGT2B26P-201ENST00000508672 1613 ntBASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 AL365361.1-201ENST00000566942 3481 ntBASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 TEK-202ENST00000406359 3935 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 AL034549.2-201ENST00000618285 3373 ntBASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 AL607077.1-201ENST00000401718 499 ntBASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 RPS17P17-201ENST00000419392 409 ntBASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 HSFY6P-201ENST00000445573 403 ntBASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 AGGF1P6-201ENST00000569213 976 ntBASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 ARF4P1-201ENST00000605447 541 ntBASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 AC079298.1-201ENST00000625026 1619 ntBASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC168Q8NDH2 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms