Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
C9orf40Q8IXQ3 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.65□□□□□ -1.66
C9orf40Q8IXQ3 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
C9orf40Q8IXQ3 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
C9orf40Q8IXQ3 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.65□□□□□ -1.66
C9orf40Q8IXQ3 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.65□□□□□ -1.66
C9orf40Q8IXQ3 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 RN7SKP95-201ENST00000362860 303 ntBASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 RNA5SP123-201ENST00000363244 119 ntBASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 RNU6-891P-201ENST00000384280 111 ntBASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 SNORA70.10-201ENST00000384515 134 ntBASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 RN7SKP97-201ENST00000410966 333 ntBASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 CBX1P3-201ENST00000413296 527 ntBASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 TXNP5-201ENST00000441043 315 ntBASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 AL137845.2-201ENST00000444292 988 ntBASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 TRY2P-201ENST00000448860 689 ntBASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 snoU13.20-201ENST00000459180 104 ntBASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 RN7SL826P-201ENST00000479724 288 ntBASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 SNORA48.9-201ENST00000516419 162 ntBASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 OR5AZ1P-201ENST00000527448 943 ntBASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 AL390726.5-202ENST00000564800 256 ntBASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 BNIP3P7-201ENST00000605641 516 ntBASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 AC133644.2-201ENST00000608142 540 ntBASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 OR7M1P-201ENST00000608946 533 ntBASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 FRG1EP-201ENST00000634469 770 ntBASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 AC019072.1-201ENST00000604535 1551 ntBASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.65□□□□□ -1.67
C9orf40Q8IXQ3 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 AC007342.5-201ENST00000571340 2142 ntBASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 AL022311.1-201ENST00000623726 19416 ntBASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 LRRC37BP1-201ENST00000398851 714 ntBASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 AL645733.1-201ENST00000402250 217 ntBASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 AC098592.2-201ENST00000413158 265 ntBASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 NPM1P22-201ENST00000427761 952 ntBASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 AL450023.3-201ENST00000440592 271 ntBASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 RSL24D1P2-201ENST00000445584 366 ntBASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 MTND6P5-201ENST00000448266 512 ntBASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 HMGB1P4-201ENST00000455362 567 ntBASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 RN7SL97P-201ENST00000486780 299 ntBASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 AC140172.1-201ENST00000502928 141 ntBASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 MYL12BP2-201ENST00000503948 512 ntBASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 GOLGA5P1-201ENST00000507317 980 ntBASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 MIR4646-201ENST00000580775 63 ntBASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 AC005377.1-201ENST00000605126 456 ntBASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 AC091905.4-201ENST00000623432 202 ntBASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 AC063976.2-201ENST00000425667 3556 ntBASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 AC004817.4-201ENST00000602396 3625 ntBASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.64□□□□□ -1.67
C9orf40Q8IXQ3 INTS6P1-201ENST00000504674 2530 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms