Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 CASC19-264ENST00000641912 1184 ntBASIC4.72□□□□□ -1.65
NIPAL3Q6P499 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NIPAL3Q6P499 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
NIPAL3Q6P499 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.72□□□□□ -1.65
NIPAL3Q6P499 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NIPAL3Q6P499 AL731532.2-201ENST00000623542 1953 ntBASIC4.72□□□□□ -1.65
NIPAL3Q6P499 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NIPAL3Q6P499 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.72□□□□□ -1.65
NIPAL3Q6P499 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.72□□□□□ -1.65
NIPAL3Q6P499 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.72□□□□□ -1.65
NIPAL3Q6P499 SCARNA15-201ENST00000607520 4325 ntBASIC4.72□□□□□ -1.65
NIPAL3Q6P499 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.72□□□□□ -1.65
NIPAL3Q6P499 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
NIPAL3Q6P499 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.65
NIPAL3Q6P499 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.71□□□□□ -1.66
NIPAL3Q6P499 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NIPAL3Q6P499 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NIPAL3Q6P499 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NIPAL3Q6P499 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NIPAL3Q6P499 SNORA67-201ENST00000384423 137 ntBASIC4.71□□□□□ -1.66
NIPAL3Q6P499 AC092642.1-201ENST00000392417 425 ntBASIC4.71□□□□□ -1.66
NIPAL3Q6P499 AL391361.1-201ENST00000405580 489 ntBASIC4.71□□□□□ -1.66
NIPAL3Q6P499 AL034374.1-201ENST00000406329 351 ntBASIC4.71□□□□□ -1.66
NIPAL3Q6P499 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.71□□□□□ -1.66
NIPAL3Q6P499 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.71□□□□□ -1.66
NIPAL3Q6P499 RNF19BPX-201ENST00000426224 625 ntBASIC4.71□□□□□ -1.66
NIPAL3Q6P499 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.71□□□□□ -1.66
NIPAL3Q6P499 MTND2P2-201ENST00000434633 945 ntBASIC4.71□□□□□ -1.66
NIPAL3Q6P499 CLUHP1-201ENST00000435012 1190 ntBASIC4.71□□□□□ -1.66
NIPAL3Q6P499 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.71□□□□□ -1.66
NIPAL3Q6P499 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.71□□□□□ -1.66
NIPAL3Q6P499 RN7SL189P-201ENST00000468631 289 ntBASIC4.71□□□□□ -1.66
NIPAL3Q6P499 AC021205.1-201ENST00000468797 348 ntBASIC4.71□□□□□ -1.66
NIPAL3Q6P499 RPS4XP1-201ENST00000482189 787 ntBASIC4.71□□□□□ -1.66
NIPAL3Q6P499 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.71□□□□□ -1.66
NIPAL3Q6P499 PCNAP1-201ENST00000505363 709 ntBASIC4.71□□□□□ -1.66
NIPAL3Q6P499 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.71□□□□□ -1.66
NIPAL3Q6P499 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC4.71□□□□□ -1.66
NIPAL3Q6P499 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.71□□□□□ -1.66
NIPAL3Q6P499 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.71□□□□□ -1.66
NIPAL3Q6P499 AL049779.2-201ENST00000553847 315 ntBASIC4.71□□□□□ -1.66
NIPAL3Q6P499 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.71□□□□□ -1.66
NIPAL3Q6P499 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.71□□□□□ -1.66
NIPAL3Q6P499 AC124856.1-201ENST00000600819 896 ntBASIC4.71□□□□□ -1.66
NIPAL3Q6P499 AC008814.1-201ENST00000603797 406 ntBASIC4.71□□□□□ -1.66
NIPAL3Q6P499 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.71□□□□□ -1.66
NIPAL3Q6P499 BX005214.3-202ENST00000619809 325 ntBASIC4.71□□□□□ -1.66
NIPAL3Q6P499 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NIPAL3Q6P499 AC019080.5-201ENST00000624891 757 ntBASIC4.71□□□□□ -1.66
NIPAL3Q6P499 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.71□□□□□ -1.66
NIPAL3Q6P499 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
NIPAL3Q6P499 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NIPAL3Q6P499 MTCO1P11-201ENST00000429111 1528 ntBASIC4.71□□□□□ -1.66
NIPAL3Q6P499 OR55B1P-203ENST00000641518 2602 ntBASIC4.71□□□□□ -1.66
NIPAL3Q6P499 AC093849.1-201ENST00000563631 2209 ntBASIC4.7□□□□□ -1.66
NIPAL3Q6P499 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 AL590806.1-201ENST00000415818 853 ntBASIC4.7□□□□□ -1.66
NIPAL3Q6P499 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 OR6K4P-201ENST00000423179 955 ntBASIC4.7□□□□□ -1.66
NIPAL3Q6P499 CYCSP11-201ENST00000436426 315 ntBASIC4.7□□□□□ -1.66
NIPAL3Q6P499 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 GTF3AP5-201ENST00000442645 697 ntBASIC4.7□□□□□ -1.66
NIPAL3Q6P499 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 AL606490.1-201ENST00000452266 765 ntBASIC4.7□□□□□ -1.66
NIPAL3Q6P499 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 AC023424.1-201ENST00000496058 459 ntBASIC4.7□□□□□ -1.66
NIPAL3Q6P499 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 AC006427.1-201ENST00000514359 712 ntBASIC4.7□□□□□ -1.66
NIPAL3Q6P499 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 MIR4472-2-201ENST00000582069 67 ntBASIC4.7□□□□□ -1.66
NIPAL3Q6P499 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 AC018695.5-201ENST00000605872 315 ntBASIC4.7□□□□□ -1.66
NIPAL3Q6P499 AP001005.3-201ENST00000622049 129 ntBASIC4.7□□□□□ -1.66
NIPAL3Q6P499 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NIPAL3Q6P499 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms