Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 SNORA9-201ENST00000384215 133 ntBASIC4.79□□□□□ -1.64
RIF1Q5UIP0 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 AL354714.3-201ENST00000447284 493 ntBASIC4.79□□□□□ -1.64
RIF1Q5UIP0 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 GLUD1P3-202ENST00000508551 200 ntBASIC4.79□□□□□ -1.64
RIF1Q5UIP0 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 RN7SKP83-201ENST00000516512 178 ntBASIC4.79□□□□□ -1.64
RIF1Q5UIP0 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 NPM1P6-201ENST00000521088 871 ntBASIC4.79□□□□□ -1.64
RIF1Q5UIP0 AC009027.1-201ENST00000604510 479 ntBASIC4.79□□□□□ -1.64
RIF1Q5UIP0 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 TEK-202ENST00000406359 3935 ntTSL 2 BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 AC020656.2-201ENST00000613291 5309 ntBASIC4.79□□□□□ -1.64
RIF1Q5UIP0 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 AC245028.2-201ENST00000458673 253 ntBASIC4.79□□□□□ -1.64
RIF1Q5UIP0 AC008958.1-201ENST00000511047 682 ntBASIC4.79□□□□□ -1.64
RIF1Q5UIP0 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 AC108064.1-201ENST00000513791 460 ntBASIC4.79□□□□□ -1.64
RIF1Q5UIP0 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 AC084783.1-201ENST00000565846 910 ntBASIC4.79□□□□□ -1.64
RIF1Q5UIP0 ZYXP1-201ENST00000617638 118 ntBASIC4.79□□□□□ -1.64
RIF1Q5UIP0 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.79□□□□□ -1.64
RIF1Q5UIP0 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RIF1Q5UIP0 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RIF1Q5UIP0 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.78□□□□□ -1.64
RIF1Q5UIP0 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC4.78□□□□□ -1.64
RIF1Q5UIP0 SNORD8-201ENST00000363915 110 ntBASIC4.78□□□□□ -1.64
RIF1Q5UIP0 MIR554-201ENST00000384874 96 ntBASIC4.78□□□□□ -1.64
RIF1Q5UIP0 RPL11P3-201ENST00000395256 523 ntBASIC4.78□□□□□ -1.64
RIF1Q5UIP0 AC069157.1-201ENST00000421749 137 ntBASIC4.78□□□□□ -1.64
RIF1Q5UIP0 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RIF1Q5UIP0 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.78□□□□□ -1.64
RIF1Q5UIP0 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.78□□□□□ -1.64
RIF1Q5UIP0 AC015795.1-201ENST00000513669 327 ntBASIC4.78□□□□□ -1.64
RIF1Q5UIP0 OR8R1P-201ENST00000543943 764 ntBASIC4.78□□□□□ -1.64
RIF1Q5UIP0 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.78□□□□□ -1.64
RIF1Q5UIP0 AC091953.5-201ENST00000622919 233 ntBASIC4.78□□□□□ -1.64
RIF1Q5UIP0 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RIF1Q5UIP0 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.78□□□□□ -1.64
RIF1Q5UIP0 SMG1P4-204ENST00000523028 4131 ntBASIC4.78□□□□□ -1.64
RIF1Q5UIP0 AL592148.3-201ENST00000608771 2646 ntBASIC4.78□□□□□ -1.64
RIF1Q5UIP0 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RIF1Q5UIP0 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC4.78□□□□□ -1.64
RIF1Q5UIP0 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RIF1Q5UIP0 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RIF1Q5UIP0 AC005261.4-201ENST00000600047 1385 ntBASIC4.78□□□□□ -1.64
RIF1Q5UIP0 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RIF1Q5UIP0 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.78□□□□□ -1.64
RIF1Q5UIP0 PPIAP9-201ENST00000403866 498 ntBASIC4.78□□□□□ -1.64
RIF1Q5UIP0 AL353626.3-201ENST00000413399 657 ntBASIC4.78□□□□□ -1.64
RIF1Q5UIP0 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.78□□□□□ -1.64
RIF1Q5UIP0 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RIF1Q5UIP0 RPS7P7-201ENST00000463499 571 ntBASIC4.78□□□□□ -1.64
RIF1Q5UIP0 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.78□□□□□ -1.64
RIF1Q5UIP0 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.78□□□□□ -1.64
RIF1Q5UIP0 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.78□□□□□ -1.64
RIF1Q5UIP0 BX005214.3-202ENST00000619809 325 ntBASIC4.78□□□□□ -1.64
RIF1Q5UIP0 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.78□□□□□ -1.64
RIF1Q5UIP0 UGP2-232ENST00000640075 567 ntTSL 5 BASIC4.78□□□□□ -1.64
RIF1Q5UIP0 ABCC13-202ENST00000463099 3842 ntBASIC4.77□□□□□ -1.65
RIF1Q5UIP0 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.77□□□□□ -1.65
RIF1Q5UIP0 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RIF1Q5UIP0 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RIF1Q5UIP0 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RIF1Q5UIP0 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.77□□□□□ -1.65
RIF1Q5UIP0 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RIF1Q5UIP0 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.77□□□□□ -1.65
RIF1Q5UIP0 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.77□□□□□ -1.65
RIF1Q5UIP0 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.77□□□□□ -1.65
RIF1Q5UIP0 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.77□□□□□ -1.65
RIF1Q5UIP0 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RIF1Q5UIP0 AL049536.1-201ENST00000625043 744 ntBASIC4.77□□□□□ -1.65
RIF1Q5UIP0 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RIF1Q5UIP0 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.77□□□□□ -1.65
RIF1Q5UIP0 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC4.77□□□□□ -1.65
RIF1Q5UIP0 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
RIF1Q5UIP0 AC233968.1-201ENST00000611212 1300 ntBASIC4.77□□□□□ -1.65
RIF1Q5UIP0 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
RIF1Q5UIP0 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RIF1Q5UIP0 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.77□□□□□ -1.65
RIF1Q5UIP0 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC4.77□□□□□ -1.65
RIF1Q5UIP0 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC4.77□□□□□ -1.65
RIF1Q5UIP0 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
RIF1Q5UIP0 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RIF1Q5UIP0 AC011742.2-201ENST00000443818 352 ntBASIC4.77□□□□□ -1.65
RIF1Q5UIP0 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms