Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC016772.1-201ENST00000444170 1261 ntBASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 HMGB1P4-201ENST00000455362 567 ntBASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 NDUFA12P1-201ENST00000455914 406 ntBASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 RN7SL354P-201ENST00000469282 294 ntBASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 RPL12P20-201ENST00000475538 479 ntBASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 RPS24P16-201ENST00000497294 392 ntBASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 RPSAP51-201ENST00000497462 645 ntBASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 AC090058.1-201ENST00000498788 435 ntBASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 AC098976.1-201ENST00000513014 541 ntBASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 RNU6-943P-201ENST00000516960 98 ntBASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 AC008147.3-201ENST00000548666 354 ntBASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 AC084759.1-201ENST00000561168 290 ntBASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 AC091042.1-201ENST00000579213 173 ntBASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 MIR7853-201ENST00000584820 132 ntBASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 MIR6780A-201ENST00000615089 68 ntBASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 AL022401.1-201ENST00000619498 108 ntBASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 AP002512.4-202ENST00000641599 4530 ntBASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 OR1L6-202ENST00000373684 1044 ntBASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 RN7SKP100-201ENST00000411258 284 ntBASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 TPT1P13-201ENST00000449760 499 ntBASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 AC090602.1-201ENST00000469695 252 ntBASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 AC073869.10-201ENST00000642016 354 ntBASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
SHROOM1Q2M3G4 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
SHROOM1Q2M3G4 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SHROOM1Q2M3G4 SAMMSON-213ENST00000641336 1521 ntBASIC5.84□□□□□ -1.48
SHROOM1Q2M3G4 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SHROOM1Q2M3G4 AC004817.4-201ENST00000602396 3625 ntBASIC5.84□□□□□ -1.48
SHROOM1Q2M3G4 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 RNA5SP241-201ENST00000391326 114 ntBASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 AL357515.1-201ENST00000402967 542 ntBASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 AL035079.1-201ENST00000405210 287 ntBASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 RSU1P3-201ENST00000412878 835 ntBASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 RPL12P9-201ENST00000412942 488 ntBASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 AC106901.1-201ENST00000425086 698 ntBASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 AC009238.2-201ENST00000431026 355 ntBASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.83□□□□□ -1.48
SHROOM1Q2M3G4 AL138787.1-202ENST00000437804 898 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms