Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 FO393422.1-201ENST00000603908 708 ntBASIC4.05□□□□□ -1.76
SSBP1Q04837 SUGT1P3-202ENST00000604259 383 ntBASIC4.05□□□□□ -1.76
SSBP1Q04837 AL121932.1-201ENST00000605542 214 ntBASIC4.05□□□□□ -1.76
SSBP1Q04837 AC108865.2-201ENST00000606881 432 ntBASIC4.05□□□□□ -1.76
SSBP1Q04837 AL353726.1-201ENST00000614041 1000 ntBASIC4.05□□□□□ -1.76
SSBP1Q04837 AL672167.1-203ENST00000641299 2975 ntBASIC4.05□□□□□ -1.76
SSBP1Q04837 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SSBP1Q04837 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.05□□□□□ -1.76
SSBP1Q04837 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSBP1Q04837 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
SSBP1Q04837 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.05□□□□□ -1.76
SSBP1Q04837 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSBP1Q04837 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SSBP1Q04837 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.04□□□□□ -1.76
SSBP1Q04837 AC087190.4-201ENST00000574616 8334 ntBASIC4.04□□□□□ -1.76
SSBP1Q04837 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.04□□□□□ -1.76
SSBP1Q04837 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SSBP1Q04837 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SSBP1Q04837 CASC19-204ENST00000641001 2055 ntBASIC4.04□□□□□ -1.76
SSBP1Q04837 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SSBP1Q04837 RN7SKP171-201ENST00000364417 303 ntBASIC4.04□□□□□ -1.76
SSBP1Q04837 RN7SKP124-201ENST00000364730 341 ntBASIC4.04□□□□□ -1.76
SSBP1Q04837 RNU1-43P-201ENST00000365052 165 ntBASIC4.04□□□□□ -1.76
SSBP1Q04837 RNU1-77P-201ENST00000390868 162 ntBASIC4.04□□□□□ -1.76
SSBP1Q04837 VDAC2P1-201ENST00000399358 958 ntBASIC4.04□□□□□ -1.76
SSBP1Q04837 Z97832.1-201ENST00000402490 328 ntBASIC4.04□□□□□ -1.76
SSBP1Q04837 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.04□□□□□ -1.76
SSBP1Q04837 SKP1P3-201ENST00000429280 487 ntBASIC4.04□□□□□ -1.76
SSBP1Q04837 AC069285.2-201ENST00000440210 275 ntBASIC4.04□□□□□ -1.76
SSBP1Q04837 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.04□□□□□ -1.76
SSBP1Q04837 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.04□□□□□ -1.76
SSBP1Q04837 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.04□□□□□ -1.76
SSBP1Q04837 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SSBP1Q04837 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.04□□□□□ -1.76
SSBP1Q04837 RN7SL214P-201ENST00000487317 265 ntBASIC4.04□□□□□ -1.76
SSBP1Q04837 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.04□□□□□ -1.76
SSBP1Q04837 AC025164.1-201ENST00000496249 478 ntBASIC4.04□□□□□ -1.76
SSBP1Q04837 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SSBP1Q04837 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.04□□□□□ -1.76
SSBP1Q04837 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.04□□□□□ -1.76
SSBP1Q04837 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.04□□□□□ -1.76
SSBP1Q04837 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.04□□□□□ -1.76
SSBP1Q04837 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.04□□□□□ -1.76
SSBP1Q04837 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SSBP1Q04837 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.04□□□□□ -1.76
SSBP1Q04837 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC4.04□□□□□ -1.76
SSBP1Q04837 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.04□□□□□ -1.76
SSBP1Q04837 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.04□□□□□ -1.76
SSBP1Q04837 AL691477.1-201ENST00000624398 162 ntBASIC4.04□□□□□ -1.76
SSBP1Q04837 LINC01109-201ENST00000603837 3081 ntBASIC4.04□□□□□ -1.76
SSBP1Q04837 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SSBP1Q04837 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
SSBP1Q04837 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.04□□□□□ -1.76
SSBP1Q04837 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSBP1Q04837 BTBD10P1-201ENST00000549824 1352 ntBASIC4.03□□□□□ -1.76
SSBP1Q04837 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
SSBP1Q04837 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSBP1Q04837 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.03□□□□□ -1.76
SSBP1Q04837 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SSBP1Q04837 SNORA17.1-201ENST00000362945 126 ntBASIC4.03□□□□□ -1.76
SSBP1Q04837 TBCAP2-201ENST00000416175 326 ntBASIC4.03□□□□□ -1.76
SSBP1Q04837 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SSBP1Q04837 RPL21P43-201ENST00000425440 472 ntBASIC4.03□□□□□ -1.76
SSBP1Q04837 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.03□□□□□ -1.76
SSBP1Q04837 RPL21P91-201ENST00000429231 479 ntBASIC4.03□□□□□ -1.76
SSBP1Q04837 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SSBP1Q04837 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.03□□□□□ -1.76
SSBP1Q04837 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.03□□□□□ -1.76
SSBP1Q04837 AC104339.1-201ENST00000465478 348 ntBASIC4.03□□□□□ -1.76
SSBP1Q04837 RPL5P30-201ENST00000465511 891 ntBASIC4.03□□□□□ -1.76
SSBP1Q04837 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.03□□□□□ -1.76
SSBP1Q04837 RPL35AP19-201ENST00000469425 329 ntBASIC4.03□□□□□ -1.76
SSBP1Q04837 RN7SL222P-201ENST00000476452 299 ntBASIC4.03□□□□□ -1.76
SSBP1Q04837 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SSBP1Q04837 OR51K1P-201ENST00000510214 950 ntBASIC4.03□□□□□ -1.76
SSBP1Q04837 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SSBP1Q04837 RNA5SP154-201ENST00000516193 111 ntBASIC4.03□□□□□ -1.76
SSBP1Q04837 AC011853.1-201ENST00000518911 454 ntBASIC4.03□□□□□ -1.76
SSBP1Q04837 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.03□□□□□ -1.76
SSBP1Q04837 OR4A46P-201ENST00000527255 933 ntBASIC4.03□□□□□ -1.76
SSBP1Q04837 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.03□□□□□ -1.76
SSBP1Q04837 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SSBP1Q04837 AC091178.1-203ENST00000584586 279 ntBASIC4.03□□□□□ -1.76
SSBP1Q04837 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.03□□□□□ -1.76
SSBP1Q04837 HTR1DP1-201ENST00000616500 888 ntBASIC4.03□□□□□ -1.76
SSBP1Q04837 AC023509.5-201ENST00000617434 807 ntBASIC4.03□□□□□ -1.76
SSBP1Q04837 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
SSBP1Q04837 AC025262.3-201ENST00000623666 360 ntBASIC4.03□□□□□ -1.76
SSBP1Q04837 CR381572.2-201ENST00000624852 397 ntBASIC4.03□□□□□ -1.76
SSBP1Q04837 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSBP1Q04837 AL355852.1-201ENST00000454081 1771 ntBASIC4.03□□□□□ -1.76
SSBP1Q04837 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSBP1Q04837 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSBP1Q04837 KPNA2P2-201ENST00000419546 1489 ntBASIC4.03□□□□□ -1.76
SSBP1Q04837 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.03□□□□□ -1.76
SSBP1Q04837 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
SSBP1Q04837 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSBP1Q04837 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SSBP1Q04837 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SSBP1Q04837 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms