Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TPM4P67936 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.47□□□□□ -1.53
TPM4P67936 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
TPM4P67936 AC005332.5-201ENST00000591222 2919 ntBASIC5.47□□□□□ -1.53
TPM4P67936 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.47□□□□□ -1.53
TPM4P67936 TTC39DP-201ENST00000416781 1688 ntBASIC5.47□□□□□ -1.53
TPM4P67936 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.53
TPM4P67936 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
TPM4P67936 CASC19-204ENST00000641001 2055 ntBASIC5.46□□□□□ -1.53
TPM4P67936 LINC01109-201ENST00000603837 3081 ntBASIC5.46□□□□□ -1.54
TPM4P67936 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
TPM4P67936 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
TPM4P67936 AL136116.2-201ENST00000404020 785 ntBASIC5.46□□□□□ -1.54
TPM4P67936 RNA5SP146-201ENST00000410743 123 ntBASIC5.46□□□□□ -1.54
TPM4P67936 RN7SKP247-201ENST00000411094 308 ntBASIC5.46□□□□□ -1.54
TPM4P67936 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.46□□□□□ -1.54
TPM4P67936 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.46□□□□□ -1.54
TPM4P67936 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.46□□□□□ -1.54
TPM4P67936 SCAND3P1-201ENST00000439854 1060 ntBASIC5.46□□□□□ -1.54
TPM4P67936 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.46□□□□□ -1.54
TPM4P67936 AL645937.3-201ENST00000453647 936 ntBASIC5.46□□□□□ -1.54
TPM4P67936 RPL7AP28-201ENST00000464513 571 ntBASIC5.46□□□□□ -1.54
TPM4P67936 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.46□□□□□ -1.54
TPM4P67936 RPL23AP37-201ENST00000479658 549 ntBASIC5.46□□□□□ -1.54
TPM4P67936 OR2A3P-201ENST00000493774 953 ntBASIC5.46□□□□□ -1.54
TPM4P67936 RN7SL466P-201ENST00000497546 295 ntBASIC5.46□□□□□ -1.54
TPM4P67936 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.46□□□□□ -1.54
TPM4P67936 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.46□□□□□ -1.54
TPM4P67936 RNA5SP473-201ENST00000516402 125 ntBASIC5.46□□□□□ -1.54
TPM4P67936 AC022826.1-201ENST00000519383 805 ntBASIC5.46□□□□□ -1.54
TPM4P67936 NMNAT1P1-201ENST00000554095 876 ntBASIC5.46□□□□□ -1.54
TPM4P67936 AC079075.1-201ENST00000559543 878 ntBASIC5.46□□□□□ -1.54
TPM4P67936 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.46□□□□□ -1.54
TPM4P67936 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.46□□□□□ -1.54
TPM4P67936 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.46□□□□□ -1.54
TPM4P67936 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.46□□□□□ -1.54
TPM4P67936 AC104695.2-201ENST00000605056 775 ntBASIC5.46□□□□□ -1.54
TPM4P67936 IMMP1LP1-201ENST00000605170 488 ntBASIC5.46□□□□□ -1.54
TPM4P67936 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.46□□□□□ -1.54
TPM4P67936 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.46□□□□□ -1.54
TPM4P67936 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TPM4P67936 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TPM4P67936 AC093909.5-201ENST00000621839 1799 ntBASIC5.46□□□□□ -1.54
TPM4P67936 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.46□□□□□ -1.54
TPM4P67936 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TPM4P67936 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TPM4P67936 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TPM4P67936 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TPM4P67936 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
TPM4P67936 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TPM4P67936 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TPM4P67936 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.45□□□□□ -1.54
TPM4P67936 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.45□□□□□ -1.54
TPM4P67936 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TPM4P67936 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TPM4P67936 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TPM4P67936 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
TPM4P67936 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.45□□□□□ -1.54
TPM4P67936 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TPM4P67936 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TPM4P67936 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.45□□□□□ -1.54
TPM4P67936 SNORA66-201ENST00000384792 133 ntBASIC5.45□□□□□ -1.54
TPM4P67936 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TPM4P67936 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.45□□□□□ -1.54
TPM4P67936 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.45□□□□□ -1.54
TPM4P67936 AL034379.1-201ENST00000423216 253 ntBASIC5.45□□□□□ -1.54
TPM4P67936 GTF2IP2-201ENST00000424290 697 ntBASIC5.45□□□□□ -1.54
TPM4P67936 AC108075.1-201ENST00000424692 529 ntBASIC5.45□□□□□ -1.54
TPM4P67936 RPL23AP19-201ENST00000436229 369 ntBASIC5.45□□□□□ -1.54
TPM4P67936 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.45□□□□□ -1.54
TPM4P67936 EIF2S2P5-201ENST00000457635 968 ntBASIC5.45□□□□□ -1.54
TPM4P67936 RN7SL649P-201ENST00000496974 275 ntBASIC5.45□□□□□ -1.54
TPM4P67936 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.45□□□□□ -1.54
TPM4P67936 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.45□□□□□ -1.54
TPM4P67936 RNA5SP360-201ENST00000516555 118 ntBASIC5.45□□□□□ -1.54
TPM4P67936 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.45□□□□□ -1.54
TPM4P67936 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.45□□□□□ -1.54
TPM4P67936 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.45□□□□□ -1.54
TPM4P67936 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.45□□□□□ -1.54
TPM4P67936 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TPM4P67936 TVP23CP2-201ENST00000571473 623 ntBASIC5.45□□□□□ -1.54
TPM4P67936 MIR744-201ENST00000578242 98 ntBASIC5.45□□□□□ -1.54
TPM4P67936 EIF1P5-201ENST00000585002 234 ntBASIC5.45□□□□□ -1.54
TPM4P67936 AC027243.2-201ENST00000602530 724 ntBASIC5.45□□□□□ -1.54
TPM4P67936 MIR6780B-201ENST00000610307 79 ntBASIC5.45□□□□□ -1.54
TPM4P67936 AC109309.2-201ENST00000612597 332 ntBASIC5.45□□□□□ -1.54
TPM4P67936 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC5.45□□□□□ -1.54
TPM4P67936 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.45□□□□□ -1.54
TPM4P67936 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TPM4P67936 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.45□□□□□ -1.54
TPM4P67936 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TPM4P67936 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TPM4P67936 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.45□□□□□ -1.54
TPM4P67936 AC092111.2-201ENST00000611627 1414 ntBASIC5.45□□□□□ -1.54
TPM4P67936 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.45□□□□□ -1.54
TPM4P67936 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
TPM4P67936 AL445487.1-201ENST00000415694 1580 ntBASIC5.45□□□□□ -1.54
TPM4P67936 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.45□□□□□ -1.54
TPM4P67936 AC104118.1-201ENST00000607625 1589 ntBASIC5.45□□□□□ -1.54
TPM4P67936 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms