Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN18P56856 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
CLDN18P56856 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.6□□□□□ -1.67
CLDN18P56856 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
CLDN18P56856 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
CLDN18P56856 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.59□□□□□ -1.67
CLDN18P56856 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLDN18P56856 AP001029.2-203ENST00000589795 4910 ntBASIC4.59□□□□□ -1.67
CLDN18P56856 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLDN18P56856 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLDN18P56856 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
CLDN18P56856 RNU6-697P-201ENST00000363348 107 ntBASIC4.59□□□□□ -1.67
CLDN18P56856 RNA5SP455-201ENST00000365190 119 ntBASIC4.59□□□□□ -1.67
CLDN18P56856 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
CLDN18P56856 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.59□□□□□ -1.67
CLDN18P56856 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CLDN18P56856 RNA5SP105-201ENST00000391123 113 ntBASIC4.59□□□□□ -1.67
CLDN18P56856 RPL5P19-201ENST00000404228 893 ntBASIC4.59□□□□□ -1.67
CLDN18P56856 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLDN18P56856 AC016769.2-201ENST00000414815 475 ntBASIC4.59□□□□□ -1.67
CLDN18P56856 GJA6P-201ENST00000415117 1042 ntBASIC4.59□□□□□ -1.67
CLDN18P56856 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.59□□□□□ -1.67
CLDN18P56856 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CLDN18P56856 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.59□□□□□ -1.67
CLDN18P56856 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.59□□□□□ -1.67
CLDN18P56856 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.59□□□□□ -1.67
CLDN18P56856 VN1R54P-201ENST00000435210 1049 ntBASIC4.59□□□□□ -1.67
CLDN18P56856 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.59□□□□□ -1.67
CLDN18P56856 RHOT1P3-201ENST00000436571 331 ntBASIC4.59□□□□□ -1.67
CLDN18P56856 RPL34P20-201ENST00000442771 351 ntBASIC4.59□□□□□ -1.67
CLDN18P56856 AL589765.3-201ENST00000446084 462 ntBASIC4.59□□□□□ -1.67
CLDN18P56856 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLDN18P56856 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.59□□□□□ -1.67
CLDN18P56856 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
CLDN18P56856 BX842559.2-201ENST00000451418 605 ntBASIC4.59□□□□□ -1.67
CLDN18P56856 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.59□□□□□ -1.67
CLDN18P56856 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLDN18P56856 RPL37AP8-201ENST00000494116 276 ntBASIC4.59□□□□□ -1.67
CLDN18P56856 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.59□□□□□ -1.67
CLDN18P56856 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.59□□□□□ -1.67
CLDN18P56856 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLDN18P56856 RNA5SP230-201ENST00000517039 122 ntBASIC4.59□□□□□ -1.67
CLDN18P56856 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.59□□□□□ -1.67
CLDN18P56856 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.59□□□□□ -1.67
CLDN18P56856 OR8A2P-201ENST00000528631 952 ntBASIC4.59□□□□□ -1.67
CLDN18P56856 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.59□□□□□ -1.67
CLDN18P56856 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.59□□□□□ -1.67
CLDN18P56856 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.59□□□□□ -1.67
CLDN18P56856 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.59□□□□□ -1.67
CLDN18P56856 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.59□□□□□ -1.67
CLDN18P56856 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.59□□□□□ -1.67
CLDN18P56856 CD24P2-201ENST00000565486 219 ntBASIC4.59□□□□□ -1.67
CLDN18P56856 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.59□□□□□ -1.67
CLDN18P56856 BNIP3P35-201ENST00000604530 490 ntBASIC4.59□□□□□ -1.67
CLDN18P56856 AC008833.1-201ENST00000611633 691 ntBASIC4.59□□□□□ -1.67
CLDN18P56856 MIR6730-201ENST00000622213 67 ntBASIC4.59□□□□□ -1.67
CLDN18P56856 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.59□□□□□ -1.67
CLDN18P56856 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.59□□□□□ -1.67
CLDN18P56856 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
CLDN18P56856 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.59□□□□□ -1.68
CLDN18P56856 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
CLDN18P56856 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CLDN18P56856 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.59□□□□□ -1.68
CLDN18P56856 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN18P56856 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.58□□□□□ -1.68
CLDN18P56856 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.58□□□□□ -1.68
CLDN18P56856 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.58□□□□□ -1.68
CLDN18P56856 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.58□□□□□ -1.68
CLDN18P56856 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN18P56856 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
CLDN18P56856 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN18P56856 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN18P56856 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN18P56856 AC131971.1-201ENST00000332881 1482 ntBASIC4.58□□□□□ -1.68
CLDN18P56856 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.58□□□□□ -1.68
CLDN18P56856 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN18P56856 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CLDN18P56856 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN18P56856 RN7SKP104-201ENST00000362605 328 ntBASIC4.58□□□□□ -1.68
CLDN18P56856 Y_RNA.62-201ENST00000362840 99 ntBASIC4.58□□□□□ -1.68
CLDN18P56856 RN7SKP113-201ENST00000363891 295 ntBASIC4.58□□□□□ -1.68
CLDN18P56856 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLDN18P56856 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CLDN18P56856 RN7SKP97-201ENST00000410966 333 ntBASIC4.58□□□□□ -1.68
CLDN18P56856 AC079809.1-201ENST00000415468 276 ntBASIC4.58□□□□□ -1.68
CLDN18P56856 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.58□□□□□ -1.68
CLDN18P56856 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN18P56856 AC009238.2-201ENST00000431026 355 ntBASIC4.58□□□□□ -1.68
CLDN18P56856 RPS27P18-201ENST00000431701 247 ntBASIC4.58□□□□□ -1.68
CLDN18P56856 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN18P56856 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN18P56856 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN18P56856 NPM1P39-201ENST00000449818 867 ntBASIC4.58□□□□□ -1.68
CLDN18P56856 RPL7P61-201ENST00000451721 751 ntBASIC4.58□□□□□ -1.68
CLDN18P56856 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.58□□□□□ -1.68
CLDN18P56856 AP000942.1-201ENST00000463969 747 ntBASIC4.58□□□□□ -1.68
CLDN18P56856 RN7SL443P-201ENST00000464331 290 ntBASIC4.58□□□□□ -1.68
CLDN18P56856 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.58□□□□□ -1.68
CLDN18P56856 AL133372.1-201ENST00000493565 745 ntBASIC4.58□□□□□ -1.68
CLDN18P56856 AC231760.1-201ENST00000498002 260 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms