Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RN7SKP59-201ENST00000410520 314 ntBASIC4.86□□□□□ -1.63
PKNOX1P55347 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.86□□□□□ -1.63
PKNOX1P55347 PTP4A1P1-201ENST00000420539 515 ntBASIC4.86□□□□□ -1.63
PKNOX1P55347 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.86□□□□□ -1.63
PKNOX1P55347 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.86□□□□□ -1.63
PKNOX1P55347 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.86□□□□□ -1.63
PKNOX1P55347 KNOP1P3-201ENST00000446933 426 ntBASIC4.86□□□□□ -1.63
PKNOX1P55347 AC002553.2-201ENST00000453217 340 ntBASIC4.86□□□□□ -1.63
PKNOX1P55347 RN7SL517P-201ENST00000462240 305 ntBASIC4.86□□□□□ -1.63
PKNOX1P55347 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.86□□□□□ -1.63
PKNOX1P55347 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PKNOX1P55347 RN7SL799P-201ENST00000475891 298 ntBASIC4.86□□□□□ -1.63
PKNOX1P55347 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.86□□□□□ -1.63
PKNOX1P55347 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.86□□□□□ -1.63
PKNOX1P55347 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
PKNOX1P55347 PGAM1P13-201ENST00000507497 754 ntBASIC4.86□□□□□ -1.63
PKNOX1P55347 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.86□□□□□ -1.63
PKNOX1P55347 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
PKNOX1P55347 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.86□□□□□ -1.63
PKNOX1P55347 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.86□□□□□ -1.63
PKNOX1P55347 AC012339.2-201ENST00000523996 453 ntBASIC4.86□□□□□ -1.63
PKNOX1P55347 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.86□□□□□ -1.63
PKNOX1P55347 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.86□□□□□ -1.63
PKNOX1P55347 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PKNOX1P55347 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.86□□□□□ -1.63
PKNOX1P55347 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.86□□□□□ -1.63
PKNOX1P55347 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.86□□□□□ -1.63
PKNOX1P55347 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PKNOX1P55347 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.86□□□□□ -1.63
PKNOX1P55347 FKBP1AP1-201ENST00000594588 318 ntBASIC4.86□□□□□ -1.63
PKNOX1P55347 VN1R81P-201ENST00000602085 372 ntBASIC4.86□□□□□ -1.63
PKNOX1P55347 AC015660.5-201ENST00000623238 564 ntBASIC4.86□□□□□ -1.63
PKNOX1P55347 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.86□□□□□ -1.63
PKNOX1P55347 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
PKNOX1P55347 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
PKNOX1P55347 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.86□□□□□ -1.63
PKNOX1P55347 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
PKNOX1P55347 AP000542.2-201ENST00000623199 6179 ntBASIC4.86□□□□□ -1.63
PKNOX1P55347 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PKNOX1P55347 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PKNOX1P55347 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.86□□□□□ -1.63
PKNOX1P55347 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.86□□□□□ -1.63
PKNOX1P55347 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PKNOX1P55347 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
PKNOX1P55347 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PKNOX1P55347 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.85□□□□□ -1.63
PKNOX1P55347 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
PKNOX1P55347 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
PKNOX1P55347 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PKNOX1P55347 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PKNOX1P55347 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PKNOX1P55347 MIR323A-201ENST00000362199 86 ntBASIC4.85□□□□□ -1.63
PKNOX1P55347 U3.2-201ENST00000362981 210 ntBASIC4.85□□□□□ -1.63
PKNOX1P55347 RNA5SP242-201ENST00000364171 118 ntBASIC4.85□□□□□ -1.63
PKNOX1P55347 RNU1-43P-201ENST00000365052 165 ntBASIC4.85□□□□□ -1.63
PKNOX1P55347 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PKNOX1P55347 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PKNOX1P55347 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PKNOX1P55347 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
PKNOX1P55347 VDAC2P1-201ENST00000399358 958 ntBASIC4.85□□□□□ -1.63
PKNOX1P55347 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.85□□□□□ -1.63
PKNOX1P55347 SLC35E1P1-201ENST00000419313 864 ntBASIC4.85□□□□□ -1.63
PKNOX1P55347 EIF4A1P1-201ENST00000420241 934 ntBASIC4.85□□□□□ -1.63
PKNOX1P55347 DDX39BP1-205ENST00000422507 192 ntBASIC4.85□□□□□ -1.63
PKNOX1P55347 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.85□□□□□ -1.63
PKNOX1P55347 AL121776.1-201ENST00000429337 372 ntBASIC4.85□□□□□ -1.63
PKNOX1P55347 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.85□□□□□ -1.63
PKNOX1P55347 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.85□□□□□ -1.63
PKNOX1P55347 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.85□□□□□ -1.63
PKNOX1P55347 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.85□□□□□ -1.63
PKNOX1P55347 OR52E7P-201ENST00000452394 933 ntBASIC4.85□□□□□ -1.63
PKNOX1P55347 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PKNOX1P55347 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PKNOX1P55347 AC016687.1-201ENST00000482574 353 ntBASIC4.85□□□□□ -1.63
PKNOX1P55347 RPS21P4-201ENST00000487122 248 ntBASIC4.85□□□□□ -1.63
PKNOX1P55347 RN7SL346P-201ENST00000491561 294 ntBASIC4.85□□□□□ -1.63
PKNOX1P55347 AC010350.1-201ENST00000504908 231 ntBASIC4.85□□□□□ -1.63
PKNOX1P55347 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.85□□□□□ -1.63
PKNOX1P55347 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
PKNOX1P55347 RN7SKP46-201ENST00000515942 234 ntBASIC4.85□□□□□ -1.63
PKNOX1P55347 RNA5SP362-201ENST00000516048 118 ntBASIC4.85□□□□□ -1.63
PKNOX1P55347 RN7SKP260-201ENST00000516907 149 ntBASIC4.85□□□□□ -1.63
PKNOX1P55347 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.85□□□□□ -1.63
PKNOX1P55347 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.85□□□□□ -1.63
PKNOX1P55347 AC025423.2-201ENST00000537570 439 ntBASIC4.85□□□□□ -1.63
PKNOX1P55347 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PKNOX1P55347 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.85□□□□□ -1.63
PKNOX1P55347 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.85□□□□□ -1.63
PKNOX1P55347 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.85□□□□□ -1.63
PKNOX1P55347 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PKNOX1P55347 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.85□□□□□ -1.63
PKNOX1P55347 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.85□□□□□ -1.63
PKNOX1P55347 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.85□□□□□ -1.63
PKNOX1P55347 AC104687.2-201ENST00000604442 342 ntBASIC4.85□□□□□ -1.63
PKNOX1P55347 AC087783.2-201ENST00000605070 562 ntBASIC4.85□□□□□ -1.63
PKNOX1P55347 SNORA35B-201ENST00000607417 129 ntBASIC4.85□□□□□ -1.63
PKNOX1P55347 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.85□□□□□ -1.63
PKNOX1P55347 AC099494.2-201ENST00000623371 978 ntBASIC4.85□□□□□ -1.63
PKNOX1P55347 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PKNOX1P55347 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 198.4 ms