Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AC144568.1-201ENST00000520139 137 ntBASIC8.44□□□□□ -1.06
NUBP1P53384 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC8.44□□□□□ -1.06
NUBP1P53384 THAP2-202ENST00000547843 672 ntTSL 2 BASIC8.44□□□□□ -1.06
NUBP1P53384 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC8.44□□□□□ -1.06
NUBP1P53384 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC8.44□□□□□ -1.06
NUBP1P53384 RN7SL14P-201ENST00000579715 298 ntBASIC8.44□□□□□ -1.06
NUBP1P53384 AC115085.1-201ENST00000588924 229 ntBASIC8.44□□□□□ -1.06
NUBP1P53384 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC8.44□□□□□ -1.06
NUBP1P53384 AP001485.1-201ENST00000604799 199 ntBASIC8.44□□□□□ -1.06
NUBP1P53384 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC8.44□□□□□ -1.06
NUBP1P53384 BX005040.2-201ENST00000620504 370 ntBASIC8.44□□□□□ -1.06
NUBP1P53384 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC8.44□□□□□ -1.06
NUBP1P53384 AP000787.3-201ENST00000634407 307 ntBASIC8.44□□□□□ -1.06
NUBP1P53384 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC8.44□□□□□ -1.06
NUBP1P53384 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC8.44□□□□□ -1.06
NUBP1P53384 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
NUBP1P53384 AL354984.1-201ENST00000371169 1854 ntTSL 2 BASIC8.44□□□□□ -1.06
NUBP1P53384 PCBP1-AS1-243ENST00000458698 1893 ntTSL 3 BASIC8.44□□□□□ -1.06
NUBP1P53384 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
NUBP1P53384 CORO2B-203ENST00000543950 3611 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
NUBP1P53384 TMEM52B-203ENST00000381923 2601 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
NUBP1P53384 AC027287.1-201ENST00000553115 1453 ntBASIC8.44□□□□□ -1.06
NUBP1P53384 NBPF19-204ENST00000611931 2051 ntTSL 5 BASIC8.44□□□□□ -1.06
NUBP1P53384 NBPF26-205ENST00000615219 2051 ntTSL 5 BASIC8.44□□□□□ -1.06
NUBP1P53384 NBPF12-207ENST00000617864 2051 ntTSL 5 BASIC8.44□□□□□ -1.06
NUBP1P53384 NBPF20-204ENST00000620821 2051 ntTSL 5 BASIC8.44□□□□□ -1.06
NUBP1P53384 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
NUBP1P53384 UBE2D3-208ENST00000394803 2227 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
NUBP1P53384 KBTBD11-OT1-204ENST00000635855 6169 ntAPPRIS P5 TSL 5 BASIC8.43□□□□□ -1.06
NUBP1P53384 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
NUBP1P53384 AL445437.1-201ENST00000623157 3087 ntBASIC8.43□□□□□ -1.06
NUBP1P53384 P2RY14-201ENST00000309170 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
NUBP1P53384 NHSL2-207ENST00000633930 13660 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
NUBP1P53384 KANSL3-206ENST00000431828 5153 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
NUBP1P53384 THNSL1-202ENST00000524413 3788 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
NUBP1P53384 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
NUBP1P53384 RN7SKP239-201ENST00000364814 295 ntBASIC8.43□□□□□ -1.06
NUBP1P53384 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
NUBP1P53384 RNU6-611P-201ENST00000384276 104 ntBASIC8.43□□□□□ -1.06
NUBP1P53384 RNU6-225P-201ENST00000384613 103 ntBASIC8.43□□□□□ -1.06
NUBP1P53384 SNORA57.2-201ENST00000391265 128 ntBASIC8.43□□□□□ -1.06
NUBP1P53384 HMGB3P1-201ENST00000393368 573 ntBASIC8.43□□□□□ -1.06
NUBP1P53384 RN7SKP236-201ENST00000410635 284 ntBASIC8.43□□□□□ -1.06
NUBP1P53384 RNU2-18P-201ENST00000411224 162 ntBASIC8.43□□□□□ -1.06
NUBP1P53384 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC8.43□□□□□ -1.06
NUBP1P53384 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC8.43□□□□□ -1.06
NUBP1P53384 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC8.43□□□□□ -1.06
NUBP1P53384 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
NUBP1P53384 FTH1P7-201ENST00000450676 552 ntBASIC8.43□□□□□ -1.06
NUBP1P53384 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC8.43□□□□□ -1.06
NUBP1P53384 RPL7P49-201ENST00000471402 708 ntBASIC8.43□□□□□ -1.06
NUBP1P53384 AC117503.1-201ENST00000472241 394 ntBASIC8.43□□□□□ -1.06
NUBP1P53384 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC8.43□□□□□ -1.06
NUBP1P53384 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC8.43□□□□□ -1.06
NUBP1P53384 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
NUBP1P53384 AC108471.1-201ENST00000513977 287 ntBASIC8.43□□□□□ -1.06
NUBP1P53384 RNU6-1092P-201ENST00000516955 87 ntBASIC8.43□□□□□ -1.06
NUBP1P53384 RNU6-685P-201ENST00000517088 95 ntBASIC8.43□□□□□ -1.06
NUBP1P53384 AC011853.1-201ENST00000518911 454 ntBASIC8.43□□□□□ -1.06
NUBP1P53384 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC8.43□□□□□ -1.06
NUBP1P53384 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC8.43□□□□□ -1.06
NUBP1P53384 ACTN1-AS1-201ENST00000553944 484 ntTSL 3 BASIC8.43□□□□□ -1.06
NUBP1P53384 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
NUBP1P53384 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC8.43□□□□□ -1.06
NUBP1P53384 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC8.43□□□□□ -1.06
NUBP1P53384 AC002044.1-201ENST00000606707 158 ntBASIC8.43□□□□□ -1.06
NUBP1P53384 AP001282.2-201ENST00000616149 309 ntBASIC8.43□□□□□ -1.06
NUBP1P53384 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
NUBP1P53384 AC103564.3-201ENST00000621194 220 ntBASIC8.43□□□□□ -1.06
NUBP1P53384 AL162377.2-201ENST00000624532 337 ntBASIC8.43□□□□□ -1.06
NUBP1P53384 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC8.43□□□□□ -1.06
NUBP1P53384 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC8.43□□□□□ -1.06
NUBP1P53384 OR2M4-202ENST00000641868 5934 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
NUBP1P53384 PAPPA-AS1-201ENST00000445861 2450 ntBASIC8.43□□□□□ -1.06
NUBP1P53384 PAN2-201ENST00000257931 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
NUBP1P53384 AHI1-202ENST00000327035 3638 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
NUBP1P53384 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
NUBP1P53384 SLC12A1-203ENST00000396577 4708 ntAPPRIS ALT1 TSL 5 BASIC8.43□□□□□ -1.06
NUBP1P53384 TP63-204ENST00000392460 1668 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
NUBP1P53384 CLEC4M-204ENST00000359059 1733 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
NUBP1P53384 GIT2-205ENST00000457474 5291 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
NUBP1P53384 EIF4BP2-201ENST00000416702 1794 ntBASIC8.43□□□□□ -1.06
NUBP1P53384 ZC3H6-201ENST00000343936 11539 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
NUBP1P53384 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
NUBP1P53384 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC8.43□□□□□ -1.06
NUBP1P53384 KBTBD12-204ENST00000407609 4302 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
NUBP1P53384 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
NUBP1P53384 DHX35-203ENST00000373325 3287 ntTSL 5 BASIC8.42□□□□□ -1.06
NUBP1P53384 SPATA13-206ENST00000424834 8603 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
NUBP1P53384 OARD1-210ENST00000479950 3330 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
NUBP1P53384 ARFIP1-205ENST00000451320 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
NUBP1P53384 DARS2-201ENST00000361951 3506 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
NUBP1P53384 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC8.42□□□□□ -1.06
NUBP1P53384 GEMIN6-201ENST00000281950 3728 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
NUBP1P53384 GGA3-202ENST00000538886 3766 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
NUBP1P53384 LINC00662-203ENST00000586954 2254 ntTSL 2 BASIC8.42□□□□□ -1.06
NUBP1P53384 SRL-201ENST00000399609 4214 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
NUBP1P53384 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
NUBP1P53384 DNALI1-201ENST00000296218 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
NUBP1P53384 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms