Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 OR6K5P-201ENST00000447050 945 ntBASIC6.62□□□□□ -1.35
MRE11P49959 RSL24D1P3-201ENST00000449255 495 ntBASIC6.62□□□□□ -1.35
MRE11P49959 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
MRE11P49959 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC6.62□□□□□ -1.35
MRE11P49959 OR52E3P-201ENST00000452083 936 ntBASIC6.62□□□□□ -1.35
MRE11P49959 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.62□□□□□ -1.35
MRE11P49959 HMGB1P38-201ENST00000490557 577 ntBASIC6.62□□□□□ -1.35
MRE11P49959 CEACAMP10-202ENST00000495431 496 ntBASIC6.62□□□□□ -1.35
MRE11P49959 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC6.62□□□□□ -1.35
MRE11P49959 AC021193.1-201ENST00000511607 420 ntBASIC6.62□□□□□ -1.35
MRE11P49959 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC6.62□□□□□ -1.35
MRE11P49959 RN7SKP238-201ENST00000516483 249 ntBASIC6.62□□□□□ -1.35
MRE11P49959 SEC11B-201ENST00000518383 499 ntBASIC6.62□□□□□ -1.35
MRE11P49959 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.62□□□□□ -1.35
MRE11P49959 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.62□□□□□ -1.35
MRE11P49959 OR56A7P-201ENST00000524865 941 ntBASIC6.62□□□□□ -1.35
MRE11P49959 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC6.62□□□□□ -1.35
MRE11P49959 OR8A2P-201ENST00000528631 952 ntBASIC6.62□□□□□ -1.35
MRE11P49959 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.62□□□□□ -1.35
MRE11P49959 OSBPL9P5-201ENST00000542581 171 ntBASIC6.62□□□□□ -1.35
MRE11P49959 AC079600.1-201ENST00000550326 297 ntBASIC6.62□□□□□ -1.35
MRE11P49959 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC6.62□□□□□ -1.35
MRE11P49959 AC023825.1-201ENST00000566704 1030 ntBASIC6.62□□□□□ -1.35
MRE11P49959 AC092121.1-201ENST00000569452 202 ntBASIC6.62□□□□□ -1.35
MRE11P49959 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.62□□□□□ -1.35
MRE11P49959 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC6.62□□□□□ -1.35
MRE11P49959 RNF138P2-201ENST00000603490 592 ntBASIC6.62□□□□□ -1.35
MRE11P49959 AC113368.1-201ENST00000603736 382 ntBASIC6.62□□□□□ -1.35
MRE11P49959 AL589674.2-201ENST00000604304 337 ntBASIC6.62□□□□□ -1.35
MRE11P49959 RNU4-5P-201ENST00000607255 135 ntBASIC6.62□□□□□ -1.35
MRE11P49959 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC6.62□□□□□ -1.35
MRE11P49959 AC092681.3-201ENST00000609463 678 ntBASIC6.62□□□□□ -1.35
MRE11P49959 AL445670.1-201ENST00000618889 801 ntBASIC6.62□□□□□ -1.35
MRE11P49959 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC6.62□□□□□ -1.35
MRE11P49959 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.62□□□□□ -1.35
MRE11P49959 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
MRE11P49959 GVINP1-202ENST00000531871 7271 ntBASIC6.62□□□□□ -1.35
MRE11P49959 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
MRE11P49959 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
MRE11P49959 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.62□□□□□ -1.35
MRE11P49959 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
MRE11P49959 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
MRE11P49959 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
MRE11P49959 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
MRE11P49959 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
MRE11P49959 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.62□□□□□ -1.35
MRE11P49959 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
MRE11P49959 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.62□□□□□ -1.35
MRE11P49959 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
MRE11P49959 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
MRE11P49959 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.61□□□□□ -1.35
MRE11P49959 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
MRE11P49959 RBMY1HP-201ENST00000382759 1389 ntBASIC6.61□□□□□ -1.35
MRE11P49959 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MRE11P49959 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
MRE11P49959 MIR16-2-201ENST00000362117 81 ntBASIC6.61□□□□□ -1.35
MRE11P49959 RNU6-298P-201ENST00000390888 96 ntBASIC6.61□□□□□ -1.35
MRE11P49959 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MRE11P49959 LRRC37BP1-201ENST00000398851 714 ntBASIC6.61□□□□□ -1.35
MRE11P49959 AL356967.1-201ENST00000406305 431 ntBASIC6.61□□□□□ -1.35
MRE11P49959 RNU4-27P-201ENST00000410889 139 ntBASIC6.61□□□□□ -1.35
MRE11P49959 NIFKP3-201ENST00000417799 865 ntBASIC6.61□□□□□ -1.35
MRE11P49959 ARL2BPP3-201ENST00000421226 480 ntBASIC6.61□□□□□ -1.35
MRE11P49959 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.61□□□□□ -1.35
MRE11P49959 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.61□□□□□ -1.35
MRE11P49959 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.61□□□□□ -1.35
MRE11P49959 VN1R108P-201ENST00000431580 830 ntBASIC6.61□□□□□ -1.35
MRE11P49959 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.61□□□□□ -1.35
MRE11P49959 AC092447.2-201ENST00000435487 669 ntBASIC6.61□□□□□ -1.35
MRE11P49959 CDY12P-201ENST00000440679 1015 ntBASIC6.61□□□□□ -1.35
MRE11P49959 AL645936.1-201ENST00000441979 518 ntBASIC6.61□□□□□ -1.35
MRE11P49959 CDY13P-201ENST00000445813 1015 ntBASIC6.61□□□□□ -1.35
MRE11P49959 Z73417.1-201ENST00000447373 778 ntBASIC6.61□□□□□ -1.35
MRE11P49959 AC004129.2-201ENST00000457229 287 ntBASIC6.61□□□□□ -1.35
MRE11P49959 RPS4XP12-201ENST00000461747 709 ntBASIC6.61□□□□□ -1.35
MRE11P49959 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC6.61□□□□□ -1.35
MRE11P49959 EIF1P7-201ENST00000487533 337 ntBASIC6.61□□□□□ -1.35
MRE11P49959 MTND4LP2-201ENST00000502312 285 ntBASIC6.61□□□□□ -1.35
MRE11P49959 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.61□□□□□ -1.35
MRE11P49959 AC008427.1-201ENST00000503102 655 ntBASIC6.61□□□□□ -1.35
MRE11P49959 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.61□□□□□ -1.35
MRE11P49959 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.61□□□□□ -1.35
MRE11P49959 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
MRE11P49959 HMGB1P47-201ENST00000511281 589 ntBASIC6.61□□□□□ -1.35
MRE11P49959 AC118465.1-201ENST00000513820 1271 ntBASIC6.61□□□□□ -1.35
MRE11P49959 PRMT5P1-201ENST00000514351 598 ntBASIC6.61□□□□□ -1.35
MRE11P49959 RN7SKP5-201ENST00000517045 272 ntBASIC6.61□□□□□ -1.35
MRE11P49959 AC010476.1-201ENST00000519111 851 ntBASIC6.61□□□□□ -1.35
MRE11P49959 AP001207.2-201ENST00000519490 539 ntBASIC6.61□□□□□ -1.35
MRE11P49959 MTCO1P47-201ENST00000523889 1271 ntBASIC6.61□□□□□ -1.35
MRE11P49959 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.61□□□□□ -1.35
MRE11P49959 AC137627.1-201ENST00000545761 289 ntBASIC6.61□□□□□ -1.35
MRE11P49959 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC6.61□□□□□ -1.35
MRE11P49959 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.61□□□□□ -1.35
MRE11P49959 AC007956.1-201ENST00000555623 542 ntBASIC6.61□□□□□ -1.35
MRE11P49959 MIR1269B-201ENST00000580405 75 ntBASIC6.61□□□□□ -1.35
MRE11P49959 AC022106.1-201ENST00000612834 766 ntBASIC6.61□□□□□ -1.35
MRE11P49959 AC021755.4-201ENST00000616620 456 ntBASIC6.61□□□□□ -1.35
MRE11P49959 METTL8-218ENST00000638989 876 ntTSL 5 BASIC6.61□□□□□ -1.35
MRE11P49959 METTL8-219ENST00000640734 726 ntTSL 2 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 175.1 ms