Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 RN7SL51P-201ENST00000468230 285 ntBASIC5.71□□□□□ -1.5
HOXD12P35452 AC079841.1-201ENST00000481228 950 ntBASIC5.71□□□□□ -1.5
HOXD12P35452 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXD12P35452 AC114322.1-201ENST00000506771 926 ntBASIC5.71□□□□□ -1.5
HOXD12P35452 RNU6-513P-201ENST00000516104 104 ntBASIC5.71□□□□□ -1.5
HOXD12P35452 CDH12P4-201ENST00000517835 295 ntBASIC5.71□□□□□ -1.5
HOXD12P35452 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXD12P35452 CDH12P3-201ENST00000517935 295 ntBASIC5.71□□□□□ -1.5
HOXD12P35452 CDH12P1-201ENST00000518435 295 ntBASIC5.71□□□□□ -1.5
HOXD12P35452 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXD12P35452 LSM3P2-201ENST00000551246 273 ntBASIC5.71□□□□□ -1.5
HOXD12P35452 MTND1P24-201ENST00000552175 861 ntBASIC5.71□□□□□ -1.5
HOXD12P35452 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXD12P35452 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXD12P35452 AC006116.5-201ENST00000591936 559 ntBASIC5.71□□□□□ -1.5
HOXD12P35452 AC063977.5-201ENST00000601044 974 ntBASIC5.71□□□□□ -1.5
HOXD12P35452 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXD12P35452 AL121652.1-201ENST00000608851 448 ntBASIC5.71□□□□□ -1.5
HOXD12P35452 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXD12P35452 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXD12P35452 OR11H2-202ENST00000641517 1085 ntBASIC5.71□□□□□ -1.5
HOXD12P35452 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXD12P35452 AC104260.2-201ENST00000623551 3497 ntBASIC5.71□□□□□ -1.5
HOXD12P35452 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXD12P35452 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXD12P35452 AC093591.2-201ENST00000565254 3843 ntBASIC5.71□□□□□ -1.5
HOXD12P35452 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXD12P35452 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXD12P35452 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXD12P35452 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXD12P35452 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HOXD12P35452 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
HOXD12P35452 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXD12P35452 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXD12P35452 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXD12P35452 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HOXD12P35452 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXD12P35452 MIR16-2-201ENST00000362117 81 ntBASIC5.7□□□□□ -1.5
HOXD12P35452 RNU6-666P-201ENST00000363499 107 ntBASIC5.7□□□□□ -1.5
HOXD12P35452 RNU4-2-201ENST00000365668 141 ntBASIC5.7□□□□□ -1.5
HOXD12P35452 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXD12P35452 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HOXD12P35452 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXD12P35452 RN7SKP125-201ENST00000410481 302 ntBASIC5.7□□□□□ -1.5
HOXD12P35452 RNA5SP498-201ENST00000411342 120 ntBASIC5.7□□□□□ -1.5
HOXD12P35452 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXD12P35452 AL133173.1-201ENST00000423458 397 ntBASIC5.7□□□□□ -1.5
HOXD12P35452 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXD12P35452 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXD12P35452 AC243772.1-201ENST00000451620 410 ntBASIC5.7□□□□□ -1.5
HOXD12P35452 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXD12P35452 RPS21P4-201ENST00000487122 248 ntBASIC5.7□□□□□ -1.5
HOXD12P35452 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXD12P35452 UBE2V1P12-201ENST00000503954 474 ntBASIC5.7□□□□□ -1.5
HOXD12P35452 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXD12P35452 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HOXD12P35452 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXD12P35452 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXD12P35452 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXD12P35452 AC004923.2-201ENST00000529649 369 ntBASIC5.7□□□□□ -1.5
HOXD12P35452 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXD12P35452 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.7□□□□□ -1.5
HOXD12P35452 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXD12P35452 GLRXP2-201ENST00000555594 321 ntBASIC5.7□□□□□ -1.5
HOXD12P35452 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXD12P35452 AC013244.3-201ENST00000605614 388 ntBASIC5.7□□□□□ -1.5
HOXD12P35452 AL359513.1-201ENST00000614364 557 ntBASIC5.7□□□□□ -1.5
HOXD12P35452 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXD12P35452 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXD12P35452 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXD12P35452 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXD12P35452 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
HOXD12P35452 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXD12P35452 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXD12P35452 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXD12P35452 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXD12P35452 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXD12P35452 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXD12P35452 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXD12P35452 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.69□□□□□ -1.5
HOXD12P35452 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXD12P35452 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXD12P35452 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXD12P35452 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
HOXD12P35452 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
HOXD12P35452 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXD12P35452 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXD12P35452 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXD12P35452 RNA5SP234-201ENST00000363916 119 ntBASIC5.69□□□□□ -1.5
HOXD12P35452 RN7SKP213-201ENST00000410746 298 ntBASIC5.69□□□□□ -1.5
HOXD12P35452 RPS3AP25-201ENST00000411660 793 ntBASIC5.69□□□□□ -1.5
HOXD12P35452 NPM1P40-201ENST00000412758 733 ntBASIC5.69□□□□□ -1.5
HOXD12P35452 AC106883.1-201ENST00000418805 562 ntBASIC5.69□□□□□ -1.5
HOXD12P35452 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXD12P35452 AC013262.1-201ENST00000426710 252 ntBASIC5.69□□□□□ -1.5
HOXD12P35452 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.69□□□□□ -1.5
HOXD12P35452 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.69□□□□□ -1.5
HOXD12P35452 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXD12P35452 CYCSP12-201ENST00000437729 300 ntBASIC5.69□□□□□ -1.5
HOXD12P35452 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms