Protein–RNA interactions for Protein: P31274

HOXC9, Homeobox protein Hox-C9, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9P31274 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC6.47□□□□□ -1.37
HOXC9P31274 RNU6-551P-201ENST00000516661 103 ntBASIC6.47□□□□□ -1.37
HOXC9P31274 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC9P31274 AC133555.2-201ENST00000550213 292 ntBASIC6.47□□□□□ -1.37
HOXC9P31274 AC243960.7-201ENST00000623532 707 ntBASIC6.47□□□□□ -1.37
HOXC9P31274 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
HOXC9P31274 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC9P31274 AC007159.1-201ENST00000566529 4706 ntBASIC6.47□□□□□ -1.37
HOXC9P31274 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXC9P31274 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.47□□□□□ -1.37
HOXC9P31274 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC9P31274 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC9P31274 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC9P31274 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HOXC9P31274 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
HOXC9P31274 SMG1P6-201ENST00000532337 2930 ntBASIC6.46□□□□□ -1.37
HOXC9P31274 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
HOXC9P31274 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.37
HOXC9P31274 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.46□□□□□ -1.37
HOXC9P31274 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
HOXC9P31274 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
HOXC9P31274 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.46□□□□□ -1.37
HOXC9P31274 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
HOXC9P31274 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.46□□□□□ -1.38
HOXC9P31274 MIR129-1-201ENST00000384972 72 ntBASIC6.46□□□□□ -1.38
HOXC9P31274 ELOCP19-201ENST00000411919 318 ntBASIC6.46□□□□□ -1.38
HOXC9P31274 ATG4AP1-201ENST00000416893 538 ntBASIC6.46□□□□□ -1.38
HOXC9P31274 QRSL1P2-201ENST00000418582 964 ntBASIC6.46□□□□□ -1.38
HOXC9P31274 NPM1P25-201ENST00000429734 854 ntBASIC6.46□□□□□ -1.38
HOXC9P31274 AC073052.1-201ENST00000440417 714 ntBASIC6.46□□□□□ -1.38
HOXC9P31274 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
HOXC9P31274 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC6.46□□□□□ -1.38
HOXC9P31274 AC073358.1-201ENST00000505671 684 ntBASIC6.46□□□□□ -1.38
HOXC9P31274 AC091868.1-201ENST00000508746 304 ntBASIC6.46□□□□□ -1.38
HOXC9P31274 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.46□□□□□ -1.38
HOXC9P31274 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HOXC9P31274 AC009643.1-201ENST00000532030 391 ntBASIC6.46□□□□□ -1.38
HOXC9P31274 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.46□□□□□ -1.38
HOXC9P31274 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC6.46□□□□□ -1.38
HOXC9P31274 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC6.46□□□□□ -1.38
HOXC9P31274 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.46□□□□□ -1.38
HOXC9P31274 AC026367.3-201ENST00000619032 590 ntBASIC6.46□□□□□ -1.38
HOXC9P31274 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
HOXC9P31274 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
HOXC9P31274 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.46□□□□□ -1.38
HOXC9P31274 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
HOXC9P31274 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
HOXC9P31274 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC6.46□□□□□ -1.38
HOXC9P31274 AC139713.2-214ENST00000642059 1811 ntBASIC6.46□□□□□ -1.38
HOXC9P31274 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.46□□□□□ -1.38
HOXC9P31274 MTCO1P8-201ENST00000416914 1523 ntBASIC6.45□□□□□ -1.38
HOXC9P31274 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
HOXC9P31274 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC9P31274 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HOXC9P31274 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC6.45□□□□□ -1.38
HOXC9P31274 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC9P31274 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC6.45□□□□□ -1.38
HOXC9P31274 RBPJP2-201ENST00000618187 1444 ntBASIC6.45□□□□□ -1.38
HOXC9P31274 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
HOXC9P31274 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC6.45□□□□□ -1.38
HOXC9P31274 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC9P31274 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
HOXC9P31274 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.45□□□□□ -1.38
HOXC9P31274 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.45□□□□□ -1.38
HOXC9P31274 LINC00993-201ENST00000420453 540 ntBASIC6.45□□□□□ -1.38
HOXC9P31274 AC006065.1-201ENST00000422539 802 ntBASIC6.45□□□□□ -1.38
HOXC9P31274 CHIAP3-201ENST00000423668 1133 ntBASIC6.45□□□□□ -1.38
HOXC9P31274 RPEP3-201ENST00000425462 676 ntBASIC6.45□□□□□ -1.38
HOXC9P31274 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC6.45□□□□□ -1.38
HOXC9P31274 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.45□□□□□ -1.38
HOXC9P31274 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.45□□□□□ -1.38
HOXC9P31274 ENPP7P11-201ENST00000505915 627 ntBASIC6.45□□□□□ -1.38
HOXC9P31274 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.45□□□□□ -1.38
HOXC9P31274 AC021733.2-201ENST00000518830 497 ntBASIC6.45□□□□□ -1.38
HOXC9P31274 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.45□□□□□ -1.38
HOXC9P31274 PYM1-205ENST00000547925 499 ntTSL 3 BASIC6.45□□□□□ -1.38
HOXC9P31274 MEG8-217ENST00000556637 924 ntTSL 5 BASIC6.45□□□□□ -1.38
HOXC9P31274 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC6.45□□□□□ -1.38
HOXC9P31274 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.45□□□□□ -1.38
HOXC9P31274 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC6.45□□□□□ -1.38
HOXC9P31274 AC093765.1-201ENST00000603758 881 ntBASIC6.45□□□□□ -1.38
HOXC9P31274 AL121932.1-201ENST00000605542 214 ntBASIC6.45□□□□□ -1.38
HOXC9P31274 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HOXC9P31274 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
HOXC9P31274 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC9P31274 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HOXC9P31274 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC6.45□□□□□ -1.38
HOXC9P31274 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
HOXC9P31274 AL442639.1-201ENST00000625030 1899 ntBASIC6.45□□□□□ -1.38
HOXC9P31274 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.45□□□□□ -1.38
HOXC9P31274 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HOXC9P31274 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.44□□□□□ -1.38
HOXC9P31274 AC007382.1-201ENST00000624376 2618 ntBASIC6.44□□□□□ -1.38
HOXC9P31274 RNU4-39P-201ENST00000362455 127 ntBASIC6.44□□□□□ -1.38
HOXC9P31274 SNORA70.2-201ENST00000364506 135 ntBASIC6.44□□□□□ -1.38
HOXC9P31274 ZNF736P10Y-201ENST00000403990 1110 ntBASIC6.44□□□□□ -1.38
HOXC9P31274 AL356967.1-201ENST00000406305 431 ntBASIC6.44□□□□□ -1.38
HOXC9P31274 AL732292.1-201ENST00000426692 226 ntBASIC6.44□□□□□ -1.38
HOXC9P31274 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HOXC9P31274 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms