Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 MIR541-201ENST00000401360 84 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 GSTA9P-201ENST00000406231 611 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 AL512422.1-201ENST00000407033 553 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC6.94□□□□□ -1.3
NFKB1P19838 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC6.94□□□□□ -1.3
NFKB1P19838 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.94□□□□□ -1.3
NFKB1P19838 MTCO1P20-201ENST00000425366 358 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 AC009362.1-201ENST00000427253 406 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 AP001324.1-201ENST00000428553 399 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC6.94□□□□□ -1.3
NFKB1P19838 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC6.94□□□□□ -1.3
NFKB1P19838 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.94□□□□□ -1.3
NFKB1P19838 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.94□□□□□ -1.3
NFKB1P19838 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.94□□□□□ -1.3
NFKB1P19838 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.94□□□□□ -1.3
NFKB1P19838 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC6.94□□□□□ -1.3
NFKB1P19838 DNAJC19P8-201ENST00000452887 259 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.94□□□□□ -1.3
NFKB1P19838 AC092757.1-201ENST00000467293 467 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.94□□□□□ -1.3
NFKB1P19838 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC6.94□□□□□ -1.3
NFKB1P19838 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC6.94□□□□□ -1.3
NFKB1P19838 AC011352.3-201ENST00000505162 593 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 HMGN1P13-201ENST00000505795 138 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 RPL7L1P7-201ENST00000509986 724 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 MTCYBP43-201ENST00000513621 740 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 OR5BK1P-201ENST00000550421 823 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 AC023080.1-201ENST00000551663 931 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.94□□□□□ -1.3
NFKB1P19838 RN7SL131P-201ENST00000579043 256 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC6.94□□□□□ -1.3
NFKB1P19838 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.94□□□□□ -1.3
NFKB1P19838 YWHAQP7-201ENST00000603536 658 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 AL139286.1-201ENST00000604465 483 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 FXYD6P1-201ENST00000604857 285 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 AC093838.1-201ENST00000613014 469 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 AC090574.1-201ENST00000623186 233 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 AC005753.1-201ENST00000623837 618 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 AP003400.3-201ENST00000624904 346 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 MIR665-201ENST00000635949 72 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.94□□□□□ -1.3
NFKB1P19838 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
NFKB1P19838 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
NFKB1P19838 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.94□□□□□ -1.3
NFKB1P19838 RACGAP1P-201ENST00000550663 1879 ntBASIC6.94□□□□□ -1.3
NFKB1P19838 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NFKB1P19838 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
NFKB1P19838 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NFKB1P19838 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NFKB1P19838 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NFKB1P19838 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
NFKB1P19838 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NFKB1P19838 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
NFKB1P19838 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.93□□□□□ -1.3
NFKB1P19838 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NFKB1P19838 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NFKB1P19838 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
NFKB1P19838 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.93□□□□□ -1.3
NFKB1P19838 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NFKB1P19838 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
NFKB1P19838 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NFKB1P19838 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
NFKB1P19838 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
NFKB1P19838 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.93□□□□□ -1.3
NFKB1P19838 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NFKB1P19838 RNA5SP302-201ENST00000364896 100 ntBASIC6.93□□□□□ -1.3
NFKB1P19838 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NFKB1P19838 MIR99A-201ENST00000384906 81 ntBASIC6.93□□□□□ -1.3
NFKB1P19838 RNU1-56P-201ENST00000391303 164 ntBASIC6.93□□□□□ -1.3
NFKB1P19838 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.93□□□□□ -1.3
NFKB1P19838 AC068533.2-201ENST00000411872 306 ntBASIC6.93□□□□□ -1.3
NFKB1P19838 B3GALNT1P1-201ENST00000420569 975 ntBASIC6.93□□□□□ -1.3
NFKB1P19838 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.93□□□□□ -1.3
NFKB1P19838 PCNPP2-201ENST00000441651 455 ntBASIC6.93□□□□□ -1.3
NFKB1P19838 CRYGGP-201ENST00000443337 145 ntBASIC6.93□□□□□ -1.3
NFKB1P19838 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.93□□□□□ -1.3
NFKB1P19838 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.93□□□□□ -1.3
NFKB1P19838 ALG13-211ENST00000473389 693 ntTSL 2 BASIC6.93□□□□□ -1.3
NFKB1P19838 RPL7P38-201ENST00000488396 739 ntBASIC6.93□□□□□ -1.3
NFKB1P19838 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.93□□□□□ -1.3
NFKB1P19838 AC018639.1-201ENST00000492994 442 ntBASIC6.93□□□□□ -1.3
NFKB1P19838 RPL23AP80-201ENST00000495605 424 ntBASIC6.93□□□□□ -1.3
NFKB1P19838 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
NFKB1P19838 RNA5SP278-201ENST00000517055 102 ntBASIC6.93□□□□□ -1.3
NFKB1P19838 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.93□□□□□ -1.3
NFKB1P19838 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.93□□□□□ -1.3
NFKB1P19838 AF235103.2-201ENST00000525753 346 ntBASIC6.93□□□□□ -1.3
NFKB1P19838 AC092375.1-201ENST00000550410 637 ntBASIC6.93□□□□□ -1.3
NFKB1P19838 DPPA3P2-201ENST00000553589 478 ntBASIC6.93□□□□□ -1.3
NFKB1P19838 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
NFKB1P19838 AC091932.1-201ENST00000569381 427 ntBASIC6.93□□□□□ -1.3
NFKB1P19838 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.93□□□□□ -1.3
NFKB1P19838 BNIP3P8-201ENST00000597863 560 ntBASIC6.93□□□□□ -1.3
NFKB1P19838 AC125494.2-201ENST00000602431 657 ntBASIC6.93□□□□□ -1.3
NFKB1P19838 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.93□□□□□ -1.3
NFKB1P19838 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
NFKB1P19838 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC6.93□□□□□ -1.3
NFKB1P19838 AC079228.1-201ENST00000624774 1049 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms