Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.05□□□□□ -1.6
XRCC1P18887 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.05□□□□□ -1.6
XRCC1P18887 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
XRCC1P18887 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
XRCC1P18887 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
XRCC1P18887 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
XRCC1P18887 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.05□□□□□ -1.6
XRCC1P18887 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.05□□□□□ -1.6
XRCC1P18887 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.05□□□□□ -1.6
XRCC1P18887 AC006455.6-201ENST00000426192 893 ntBASIC5.05□□□□□ -1.6
XRCC1P18887 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.05□□□□□ -1.6
XRCC1P18887 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.05□□□□□ -1.6
XRCC1P18887 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.05□□□□□ -1.6
XRCC1P18887 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.05□□□□□ -1.6
XRCC1P18887 RNA5SP103-201ENST00000459503 118 ntBASIC5.05□□□□□ -1.6
XRCC1P18887 RN7SL189P-201ENST00000468631 289 ntBASIC5.05□□□□□ -1.6
XRCC1P18887 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.05□□□□□ -1.6
XRCC1P18887 AC016687.1-201ENST00000482574 353 ntBASIC5.05□□□□□ -1.6
XRCC1P18887 AC231760.1-201ENST00000498002 260 ntBASIC5.05□□□□□ -1.6
XRCC1P18887 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.05□□□□□ -1.6
XRCC1P18887 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.05□□□□□ -1.6
XRCC1P18887 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
XRCC1P18887 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
XRCC1P18887 AL390334.1-201ENST00000556395 450 ntBASIC5.05□□□□□ -1.6
XRCC1P18887 AP005262.1-201ENST00000582646 997 ntBASIC5.05□□□□□ -1.6
XRCC1P18887 RN7SL435P-201ENST00000584418 282 ntBASIC5.05□□□□□ -1.6
XRCC1P18887 AC015914.2-201ENST00000618167 288 ntBASIC5.05□□□□□ -1.6
XRCC1P18887 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
XRCC1P18887 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
XRCC1P18887 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.05□□□□□ -1.6
XRCC1P18887 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
XRCC1P18887 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
XRCC1P18887 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.05□□□□□ -1.6
XRCC1P18887 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.05□□□□□ -1.6
XRCC1P18887 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
XRCC1P18887 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.05□□□□□ -1.6
XRCC1P18887 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
XRCC1P18887 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.04□□□□□ -1.6
XRCC1P18887 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
XRCC1P18887 SOCS5P3-201ENST00000425115 1576 ntBASIC5.04□□□□□ -1.6
XRCC1P18887 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
XRCC1P18887 CASC19-281ENST00000642118 1554 ntBASIC5.04□□□□□ -1.6
XRCC1P18887 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.04□□□□□ -1.6
XRCC1P18887 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
XRCC1P18887 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
XRCC1P18887 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
XRCC1P18887 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
XRCC1P18887 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
XRCC1P18887 AC007996.1-201ENST00000620414 2821 ntBASIC5.04□□□□□ -1.6
XRCC1P18887 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
XRCC1P18887 SNURFL-201ENST00000309296 343 ntBASIC5.04□□□□□ -1.6
XRCC1P18887 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
XRCC1P18887 MIR589-201ENST00000385238 99 ntBASIC5.04□□□□□ -1.6
XRCC1P18887 CHMP1B2P-201ENST00000399581 597 ntBASIC5.04□□□□□ -1.6
XRCC1P18887 AL589647.1-201ENST00000402485 466 ntBASIC5.04□□□□□ -1.6
XRCC1P18887 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.04□□□□□ -1.6
XRCC1P18887 RN7SKP125-201ENST00000410481 302 ntBASIC5.04□□□□□ -1.6
XRCC1P18887 CASKP1-201ENST00000412870 582 ntBASIC5.04□□□□□ -1.6
XRCC1P18887 DDX39BP1-205ENST00000422507 192 ntBASIC5.04□□□□□ -1.6
XRCC1P18887 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.04□□□□□ -1.6
XRCC1P18887 VN1R54P-201ENST00000435210 1049 ntBASIC5.04□□□□□ -1.6
XRCC1P18887 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.04□□□□□ -1.6
XRCC1P18887 AC092647.3-201ENST00000443044 633 ntBASIC5.04□□□□□ -1.6
XRCC1P18887 MTCYBP14-201ENST00000457471 715 ntBASIC5.04□□□□□ -1.6
XRCC1P18887 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.04□□□□□ -1.6
XRCC1P18887 RN7SKP147-201ENST00000517154 244 ntBASIC5.04□□□□□ -1.6
XRCC1P18887 AP000859.1-201ENST00000525536 307 ntBASIC5.04□□□□□ -1.6
XRCC1P18887 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.04□□□□□ -1.6
XRCC1P18887 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.04□□□□□ -1.6
XRCC1P18887 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.04□□□□□ -1.6
XRCC1P18887 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.04□□□□□ -1.6
XRCC1P18887 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.04□□□□□ -1.6
XRCC1P18887 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.04□□□□□ -1.6
XRCC1P18887 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.04□□□□□ -1.6
XRCC1P18887 AF117829.2-201ENST00000619538 361 ntBASIC5.04□□□□□ -1.6
XRCC1P18887 AC015660.5-201ENST00000623238 564 ntBASIC5.04□□□□□ -1.6
XRCC1P18887 AC015871.5-202ENST00000623252 701 ntBASIC5.04□□□□□ -1.6
XRCC1P18887 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.04□□□□□ -1.6
XRCC1P18887 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.04□□□□□ -1.6
XRCC1P18887 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
XRCC1P18887 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
XRCC1P18887 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
XRCC1P18887 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.04□□□□□ -1.6
XRCC1P18887 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
XRCC1P18887 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
XRCC1P18887 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
XRCC1P18887 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
XRCC1P18887 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
XRCC1P18887 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.04□□□□□ -1.6
XRCC1P18887 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.04□□□□□ -1.6
XRCC1P18887 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
XRCC1P18887 AC006210.2-201ENST00000367074 1545 ntBASIC5.03□□□□□ -1.6
XRCC1P18887 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.03□□□□□ -1.6
XRCC1P18887 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
XRCC1P18887 Y_RNA.62-201ENST00000362840 99 ntBASIC5.03□□□□□ -1.6
XRCC1P18887 RNU4-4P-201ENST00000364588 130 ntBASIC5.03□□□□□ -1.6
XRCC1P18887 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
XRCC1P18887 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.03□□□□□ -1.6
XRCC1P18887 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.03□□□□□ -1.6
XRCC1P18887 AL078599.1-201ENST00000402075 293 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms