Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 MIR6861-201ENST00000618657 64 ntBASIC4.33□□□□□ -1.72
ATF1P18846 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.33□□□□□ -1.72
ATF1P18846 TMEM30CP-203ENST00000637814 1035 ntBASIC4.33□□□□□ -1.72
ATF1P18846 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ATF1P18846 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
ATF1P18846 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ATF1P18846 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
ATF1P18846 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.33□□□□□ -1.72
ATF1P18846 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ATF1P18846 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.33□□□□□ -1.72
ATF1P18846 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.32□□□□□ -1.72
ATF1P18846 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
ATF1P18846 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATF1P18846 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATF1P18846 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATF1P18846 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATF1P18846 AC011493.1-201ENST00000596753 1632 ntBASIC4.32□□□□□ -1.72
ATF1P18846 AL034370.1-201ENST00000397254 1590 ntBASIC4.32□□□□□ -1.72
ATF1P18846 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATF1P18846 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
ATF1P18846 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATF1P18846 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATF1P18846 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATF1P18846 RNA5SP183-201ENST00000362452 119 ntBASIC4.32□□□□□ -1.72
ATF1P18846 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATF1P18846 MIR143-201ENST00000385300 106 ntBASIC4.32□□□□□ -1.72
ATF1P18846 SNORA77-201ENST00000408716 125 ntBASIC4.32□□□□□ -1.72
ATF1P18846 RN7SKP114-201ENST00000410327 279 ntBASIC4.32□□□□□ -1.72
ATF1P18846 RN7SKP59-201ENST00000410520 314 ntBASIC4.32□□□□□ -1.72
ATF1P18846 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.32□□□□□ -1.72
ATF1P18846 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
ATF1P18846 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.32□□□□□ -1.72
ATF1P18846 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.32□□□□□ -1.72
ATF1P18846 RPS26P2-201ENST00000440331 348 ntBASIC4.32□□□□□ -1.72
ATF1P18846 RPS29P9-201ENST00000440360 171 ntBASIC4.32□□□□□ -1.72
ATF1P18846 Z80107.2-201ENST00000445127 392 ntBASIC4.32□□□□□ -1.72
ATF1P18846 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.32□□□□□ -1.72
ATF1P18846 AC009127.1-201ENST00000467090 155 ntBASIC4.32□□□□□ -1.72
ATF1P18846 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.32□□□□□ -1.72
ATF1P18846 AC108693.1-201ENST00000496068 432 ntBASIC4.32□□□□□ -1.72
ATF1P18846 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.32□□□□□ -1.72
ATF1P18846 PGAM1P13-201ENST00000507497 754 ntBASIC4.32□□□□□ -1.72
ATF1P18846 AC012339.2-201ENST00000523996 453 ntBASIC4.32□□□□□ -1.72
ATF1P18846 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.32□□□□□ -1.72
ATF1P18846 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.32□□□□□ -1.72
ATF1P18846 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.32□□□□□ -1.72
ATF1P18846 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ATF1P18846 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.32□□□□□ -1.72
ATF1P18846 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.32□□□□□ -1.72
ATF1P18846 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.32□□□□□ -1.72
ATF1P18846 AC104687.2-201ENST00000604442 342 ntBASIC4.32□□□□□ -1.72
ATF1P18846 AC079395.2-201ENST00000610982 737 ntBASIC4.32□□□□□ -1.72
ATF1P18846 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.32□□□□□ -1.72
ATF1P18846 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATF1P18846 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATF1P18846 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ATF1P18846 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
ATF1P18846 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ATF1P18846 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ATF1P18846 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ATF1P18846 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.31□□□□□ -1.72
ATF1P18846 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
ATF1P18846 BTBD10P1-201ENST00000549824 1352 ntBASIC4.31□□□□□ -1.72
ATF1P18846 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
ATF1P18846 AC108751.5-201ENST00000492880 1336 ntBASIC4.31□□□□□ -1.72
ATF1P18846 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.31□□□□□ -1.72
ATF1P18846 RNA5SP242-201ENST00000364171 118 ntBASIC4.31□□□□□ -1.72
ATF1P18846 RNU1-43P-201ENST00000365052 165 ntBASIC4.31□□□□□ -1.72
ATF1P18846 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.31□□□□□ -1.72
ATF1P18846 RAB5CP1-201ENST00000395972 580 ntBASIC4.31□□□□□ -1.72
ATF1P18846 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.31□□□□□ -1.72
ATF1P18846 SNORA81-201ENST00000408493 178 ntBASIC4.31□□□□□ -1.72
ATF1P18846 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
ATF1P18846 RNU6-233P-201ENST00000410845 141 ntBASIC4.31□□□□□ -1.72
ATF1P18846 Z68694.1-201ENST00000413929 841 ntBASIC4.31□□□□□ -1.72
ATF1P18846 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.31□□□□□ -1.72
ATF1P18846 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.31□□□□□ -1.72
ATF1P18846 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ATF1P18846 RPS27P18-201ENST00000431701 247 ntBASIC4.31□□□□□ -1.72
ATF1P18846 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.31□□□□□ -1.72
ATF1P18846 OR52E7P-201ENST00000452394 933 ntBASIC4.31□□□□□ -1.72
ATF1P18846 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ATF1P18846 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.31□□□□□ -1.72
ATF1P18846 RN7SL517P-201ENST00000462240 305 ntBASIC4.31□□□□□ -1.72
ATF1P18846 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.31□□□□□ -1.72
ATF1P18846 DEFB109F-201ENST00000491870 277 ntBASIC4.31□□□□□ -1.72
ATF1P18846 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
ATF1P18846 AL136038.1-201ENST00000497246 351 ntBASIC4.31□□□□□ -1.72
ATF1P18846 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.31□□□□□ -1.72
ATF1P18846 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.31□□□□□ -1.72
ATF1P18846 BX510359.5-201ENST00000515651 304 ntBASIC4.31□□□□□ -1.72
ATF1P18846 RNA5SP362-201ENST00000516048 118 ntBASIC4.31□□□□□ -1.72
ATF1P18846 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.31□□□□□ -1.72
ATF1P18846 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ATF1P18846 AC008126.1-201ENST00000549019 480 ntBASIC4.31□□□□□ -1.72
ATF1P18846 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.31□□□□□ -1.72
ATF1P18846 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.31□□□□□ -1.72
ATF1P18846 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
ATF1P18846 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.31□□□□□ -1.72
ATF1P18846 FKBP1AP1-201ENST00000594588 318 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms